iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Atr-002430

Ensembl Protein ID

ERN16085

UniProt Accession

U5D1J3; U5D1J3_AMBTC

Genbank Protein ID

ERN16085.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

KI392485

Gene Name

AMTR_s00030p00159240

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AMTR_s00030p00159240	ERN16085	ERN16085

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	6.60e-34	116.3	5	79

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggk.tcPvtrqplteedlvPnltlrrliqawceenss 74
           evp++flCpIsl++MrdPv++++Gi+ydr+s+ekw+ ++++ +cPvt+q+l++++l+Pn+tlrrliqawc +nss
   Q: 5    EVPPYFLCPISLQIMRDPVTVCTGISYDRESMEKWIYTYKNtSCPVTNQTLSDQELTPNHTLRRLIQAWCTANSS 79
           69**********************************7766669****************************9986 PP

Organism

Amborella trichopoda

Protein Sequence
(Fasta)

MDTIEVPPYF LCPISLQIMR DPVTVCTGIS YDRESMEKWI YTYKNTSCPV TNQTLSDQEL 60
TPNHTLRRLI QAWCTANSSN GIERFPTPKP PVCLERVNQL LAVARLNDPK LSSLRELRDL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATACAA TAGAAGTCCC CCCATATTTC CTTTGCCCTA TCTCCCTCCA AATCATGAGA 60
GACCCAGTAA CTGTTTGCAC AGGAATAAGC TATGATAGAG AGAGCATGGA GAAATGGATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

atr:18444383

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000941	Aegilops tauschii	41.43	4.00e-72	263.00
IUUC-Aly-006194	Arabidopsis lyrata	45.70	5.00e-98	350.00
IUUC-Ath-007471	Arabidopsis thaliana	45.07	7.00e-98	349.00
IUUC-Bdi-014627	Brachypodium distachyon	43.46	2.00e-76	278.00
IUUC-Bol-015755	Brassica oleracea	46.32	1.00e-102	365.00
IUUC-Bra-016841	Brassica rapa	46.08	4.00e-103	366.00
IUUC-Gma-043606	Glycine max	48.64	7.00e-107	379.00
IUUC-Hvu-047293	Hordeum vulgare	42.16	2.00e-73	268.00
IUUC-Lpe-051489	Leersia perrieri	41.95	7.00e-69	253.00
IUUC-Mtr-058052	Medicago truncatula	50.00	3.00e-116	410.00
IUUC-Mac-064692	Musa acuminata	43.28	3.00e-89	320.00
IUUC-Oba-075095	Oryza barthii	41.13	1.00e-62	232.00
IUUC-Ogl-077664	Oryza glaberrima	40.84	8.00e-65	239.00
IUUC-Ogu-079030	Oryza glumaepatula	40.50	4.00e-61	227.00
IUUC-Oin-079734	Oryza indica	40.50	3.00e-61	228.00
IUUC-Ome-081839	Oryza meridionalis	42.86	6.00e-75	273.00
IUUC-Oni-082818	Oryza nivara	41.42	5.00e-60	223.00
IUUC-Opu-084067	Oryza punctata	42.86	7.00e-83	299.00
IUUC-Oru-085239	Oryza rufipogon	40.50	3.00e-61	228.00
IUUC-Osa-086041	Oryza sativa	40.50	4.00e-61	227.00
IUUC-Ppa-095941	Physcomitrella patens	37.72	7.00e-69	253.00
IUUC-Pop-099941	Populus trichocarpa	49.76	2.00e-120	424.00
IUUC-Ppe-102059	Prunus persica	50.75	1.00e-116	412.00
IUUC-Sit-110571	Setaria italica	44.36	3.00e-83	301.00
IUUC-Sly-110993	Solanum lycopersicum	50.25	1.00e-117	415.00
IUUC-Stu-112276	Solanum tuberosum	50.74	9.00e-119	419.00
IUUC-Sbi-114243	Sorghum bicolor	43.17	2.00e-78	285.00
IUUC-Tca-121107	Theobroma cacao	51.71	4.00e-119	419.00
IUUC-Tae-124810	Triticum aestivum	42.11	3.00e-82	297.00
IUUC-Tur-126719	Triticum urartu	40.09	1.00e-77	282.00
IUUC-Vvi-131052	Vitis vinifera	51.68	1.00e-116	411.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence