iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114664

UUCD1 version

UUC-SoB-01322

Ensembl Protein ID

Sb09g017890.1

UniProt Accession

A0A1B6P864; A0A1B6P864_SORBI

Genbank Protein ID

KXG21812.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000768

Gene Name

SORBI_009G110500

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb09g017890	Sb09g017890.1	Sb09g017890.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.00e-08	34.5	145	187

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+C  +++dg   ++lp CgH fhadC+ +w       + +++CPlCr
   Q: 145  CAVCIVELRDGdsARLLPrCGHRFHADCVGAW------LRLHATCPLCR 187
           ****999966655888888*************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MSTVGSGSLS PPAAAASSPP AVVEDTSSHW APHGPVLTAC VVGINVLMIL LIFFFFWRYF 60
SGKRRGPSSA SSGDDDGASS SASLPVASPW AWAASRHQRR SSKDHGPQPV DDVASALPVY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTGCAAACA TTCTTCTTTG CTGCTGCCTT TTCCTCTCTC CTTCATATCT CTCGTTTTAT 60
TTCCTACTAC TTTTTTCCTT AGAGATCGCT CGATCTTTGT GATCTTTTTC TTCCCAATTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Hvu-047240	Hordeum vulgare	53.75	3.00e-34	137.00
IUUC-Lpe-051387	Leersia perrieri	54.60	7.00e-43	165.00
IUUC-Oba-075233	Oryza barthii	55.56	5.00e-36	143.00
IUUC-Ogl-077455	Oryza glaberrima	57.14	6.00e-40	157.00
IUUC-Ogu-078923	Oryza glumaepatula	56.89	6.00e-39	152.00
IUUC-Oin-080000	Oryza indica	57.14	8.00e-40	156.00
IUUC-Oni-082563	Oryza nivara	55.93	1.00e-41	161.00
IUUC-Opu-083632	Oryza punctata	57.14	1.00e-41	163.00
IUUC-Oru-085242	Oryza rufipogon	56.55	3.00e-40	156.00
IUUC-Osa-085994	Oryza sativa	55.17	2.00e-41	160.00
IUUC-Sit-109834	Setaria italica	62.96	5.00e-34	136.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence