iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014870

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000881

Gene Name

LOC100843956; BRADI_2g22320

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI2G22320	BRADI2G22320.1	BRADI2G22320.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.90e-32	111.1	275	346

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 3    peeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           p +f+CpIsl+lMrdPvv++sG+tydr+sI +w+ sg++tcP+t+q lt+ +lvPn++l++li++wc en++
   Q: 275  PLDFRCPISLDLMRDPVVSASGQTYDRESITRWFGSGKSTCPKTGQVLTSLELVPNKALKNLISRWCRENGV 346
           779******************************************************************986 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MANARNAAAA GSPSSSSSSY SSSAPDAEIL RSLHRLARDL AAAEAPAPFL RAVFASVSRR 60
AKLLVAVFDD LLGVVGRLPR SASLCLREVL LVLQRFKAVV ADCSARSRMR LLLQSDEVAA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTCACGCATT CGTTGCCTTC TGATCACCGC AAATGGCTAA CGCAAGAAAC GCAGCGGCGG 60
CTGGGTCGCC TTCTTCTTCT TCGTCTTCAT ACTCCTCATC GGCGCCCGAC GCGGAGATCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

bdi:100843956

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005828	Arabidopsis lyrata	45.48	2.00e-127	448.00
IUUC-Ath-007101	Arabidopsis thaliana	45.76	1.00e-127	449.00
IUUC-Bol-015511	Brassica oleracea	44.02	3.00e-126	445.00
IUUC-Bra-017197	Brassica rapa	44.17	1.00e-126	446.00
IUUC-Hvu-047557	Hordeum vulgare	89.54	0.00e+00	832.00
IUUC-Lpe-051445	Leersia perrieri	81.54	0.00e+00	805.00
IUUC-Mtr-058241	Medicago truncatula	44.46	6.00e-112	397.00
IUUC-Oba-075591	Oryza barthii	82.81	0.00e+00	785.00
IUUC-Obr-076550	Oryza brachyantha	84.23	0.00e+00	701.00
IUUC-Ogl-077709	Oryza glaberrima	82.81	0.00e+00	785.00
IUUC-Ogu-078626	Oryza glumaepatula	82.81	0.00e+00	785.00
IUUC-Oin-080113	Oryza indica	82.65	0.00e+00	784.00
IUUC-Olo-080301	Oryza longistaminata	77.60	1.00e-147	516.00
IUUC-Ome-081924	Oryza meridionalis	81.60	0.00e+00	791.00
IUUC-Oni-082284	Oryza nivara	82.65	0.00e+00	782.00
IUUC-Opu-083971	Oryza punctata	82.08	0.00e+00	763.00
IUUC-Oru-084898	Oryza rufipogon	82.49	0.00e+00	823.00
IUUC-Sly-111346	Solanum lycopersicum	44.92	2.00e-133	469.00
IUUC-Stu-112435	Solanum tuberosum	45.31	5.00e-132	464.00
IUUC-Tae-125773	Triticum aestivum	89.46	0.00e+00	765.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence