iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099296

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Ubiquitin-conjugating enzyme family protein

Genbank Nucleotide ID

CM000347

Gene Name

POPTRDRAFT_580906; POPTR_0011s05240g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0011s05240	POPTR_0011s05240.1	POPTR_0011s05240.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E2/UBC	5.50e-26	92.1	680	824

Active Site

Position(s)	Description	Evidence
761	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU00388}

Domain Profile

E2/UBC

   S: 2    lkkelkelekdppegisakpvdesdltewevlilGpedtpYeggvFkleiefpedYPfkPPkvkfltk..ifhPnvyenGkvClsilk... 87
           +++e + lek+ pe+i ++  ++  ++ ++++i+G ++tpY++g+F ++i +p+ YP +PP v++ +   + +Pn+ye+Gk+Cls+l+   
   Q: 680  VQQEWSILEKNLPESIYVRIYED-RMDLLRAAIVGSNGTPYHDGLFFFDIFLPPGYPHEPPLVHYHSGglRVNPNLYESGKICLSLLNtwt 769
           78999******************.5******************************************999*****************8788 PP
   S: 88   ..eeekWsp.alsvesvllsiqsll..aepnpesplneeaa..ellkknreeykk 135
              +e W+p  +s+ +vlls+q+l+  ++p+++++ ++++    + +kn  +y++
   Q: 770  gtGSEVWNPeSSSILQVLLSLQALVlnEKPYFNEAGYDKQIgrAEGEKNSISYNE 824
           8889*****7789***********98777*****999888733334444445665 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MDMLRSDSDW ESCSDNGSSS EDIEELDFLY GGRASSIFSS LEESIGKIDD FLSFERGFVH 60
GDIVSSVTDP SGQMGRVVNV NMLVNLENRH GKIIKDVDSK KLLKIRSISV GDYVVHGPWI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTCCCAGTCA CATAAGCCTT CTGTTTTTCT TTTCTTGGCC AAGAAAGTGC GAGGAAAGTC 60
TGAAGAATTT TGTCTTTATT GCCAAGTTAT GAATTCGGTT GAGTTCTTTT GATTGGCTCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR000608--UBQ-conjugat_E2
IPR016135--UBQ-conjugating_enzyme/RWD

PROSITE

PS50127--UBIQUITIN_CONJUGAT_2

Pfam

PF00179--UQ_con

Gene Ontology

GO:0005737--C:cytoplasm
GO:0061630--F:ubiquitin protein ligase activity
GO:0031625--F:ubiquitin protein ligase binding

KEGG

pop:POPTR_0011s05240g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000866	Aegilops tauschii	46.77	0.00e+00	677.00
IUUC-Aly-005447	Arabidopsis lyrata	50.99	0.00e+00	871.00
IUUC-Ath-007412	Arabidopsis thaliana	50.33	0.00e+00	844.00
IUUC-Bdi-014823	Brachypodium distachyon	46.98	0.00e+00	714.00
IUUC-Bol-015113	Brassica oleracea	49.83	0.00e+00	842.00
IUUC-Bra-017538	Brassica rapa	50.89	0.00e+00	851.00
IUUC-Gma-043816	Glycine max	57.42	0.00e+00	978.00
IUUC-Hvu-047271	Hordeum vulgare	47.22	0.00e+00	677.00
IUUC-Lpe-051011	Leersia perrieri	47.85	0.00e+00	721.00
IUUC-Lma-053064	Leptosphaeria maculans	36.76	4.00e-33	136.00
IUUC-Mtr-058547	Medicago truncatula	54.75	0.00e+00	890.00
IUUC-Mac-064763	Musa acuminata	47.57	0.00e+00	761.00
IUUC-Oba-075343	Oryza barthii	48.16	0.00e+00	720.00
IUUC-Obr-076056	Oryza brachyantha	47.84	0.00e+00	742.00
IUUC-Ogl-076992	Oryza glaberrima	48.16	0.00e+00	720.00
IUUC-Ogu-078577	Oryza glumaepatula	48.16	0.00e+00	719.00
IUUC-Oin-080041	Oryza indica	48.16	0.00e+00	721.00
IUUC-Olo-080416	Oryza longistaminata	48.18	0.00e+00	655.00
IUUC-Ome-081223	Oryza meridionalis	48.49	0.00e+00	728.00
IUUC-Oni-082698	Oryza nivara	48.16	0.00e+00	719.00
IUUC-Opu-083990	Oryza punctata	47.84	0.00e+00	737.00
IUUC-Oru-085168	Oryza rufipogon	48.16	0.00e+00	720.00
IUUC-Ppe-101182	Prunus persica	61.26	0.00e+00	998.00
IUUC-Smo-109361	Selaginella moellendorffii	38.88	1.00e-164	573.00
IUUC-Sit-110593	Setaria italica	47.59	0.00e+00	707.00
IUUC-Sly-111703	Solanum lycopersicum	53.81	0.00e+00	941.00
IUUC-Stu-112096	Solanum tuberosum	53.49	0.00e+00	910.00
IUUC-Sbi-114682	Sorghum bicolor	47.31	0.00e+00	720.00
IUUC-Tca-121300	Theobroma cacao	60.87	0.00e+00	994.00
IUUC-Tae-124228	Triticum aestivum	46.99	0.00e+00	674.00
IUUC-Tur-126140	Triticum urartu	46.72	0.00e+00	657.00
IUUC-Vvi-131407	Vitis vinifera	62.61	0.00e+00	1053.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence