iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Dre-027455

Ensembl Protein ID

ENSDARP00000135945.1

UniProt Accession

F1REQ6; F1REQ6_DANRE

Genbank Protein ID

ENSDARP00000054743

Protein Name

Prickle homolog 2b

Genbank Nucleotide ID

BX511159

Gene Name

prickle2b

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000037593.6	ENSDART00000162081.1	ENSDARP00000135945.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Alpha-Helix/UIM	27.15	1.00e-05	49.30	IUUC-Ath-007530

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Danio rerio

Protein Sequence
(Fasta)

MPLEMEKTVT KLMYDFQRNS TSDDDSGCAL EEYAWVPPGL KPEQVHQYYS SLPEDKVPYV 60
NSPGEKYRIK QLLHQLPPHD NEVRYCNSLD DEEKRELKLF SNQRKRENLG RGNVRPFPVT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAGGAAGCAG ATTTGCCACC TCTCAGCACT GTATGTTCTC CTTTCAGCCT CTTTCTCTCT 60
GTCTTTCCTC ATTGCTTGTT CCTCCACTCC ATCAGCTCTT TTTTTAATGG TTTTAGTGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0440--LIM domain
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0677--Repeat
KW-0862--Zinc

Interpro

IPR033725--LIM1_prickle
IPR033726--LIM2_prickle
IPR033727--LIM3_prickle
IPR010442--PET_domain
IPR033723--PET_prickle
IPR001781--Znf_LIM

PROSITE

PS00478--LIM_DOMAIN_1
PS50023--LIM_DOMAIN_2
PS51303--PET

Pfam

PF00412--LIM
PF06297--PET

SMART

SM00132--LIM

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000888	Aegilops tauschii	22.92	1.00e-05	44.70
IUUC-Atr-002465	Amborella trichopoda	25.00	2.00e-05	44.30
IUUC-Aly-005589	Arabidopsis lyrata	27.63	7.00e-07	49.30
IUUC-Ath-007530	Arabidopsis thaliana	27.59	5.00e-07	49.70
IUUC-Ame-011762	Astyanax mexicanus	83.73	0.00e+00	1257.00
IUUC-Bdi-014789	Brachypodium distachyon	23.93	7.00e-06	45.40
IUUC-Bol-015361	Brassica oleracea	27.52	3.00e-07	50.40
IUUC-Bra-016788	Brassica rapa	43.24	6.20e-02	32.00
IUUC-Cpo-021667	Cavia porcellus	27.66	2.00e-22	100.00
IUUC-Dse-031181	Dothistroma septosporum	27.56	2.00e-09	57.80
IUUC-Dme-031605	Drosophila melanogaster	68.51	1.00e-135	478.00
IUUC-Fal-037626	Ficedula albicollis	27.66	1.00e-22	102.00
IUUC-Gga-040724	Gallus gallus	67.14	0.00e+00	988.00
IUUC-Gma-043003	Glycine max	26.47	4.00e-04	39.70
IUUC-Hvu-047787	Hordeum vulgare	28.81	8.00e-05	42.40
IUUC-Lpe-050858	Leersia perrieri	22.92	5.00e-05	42.70
IUUC-Loc-052468	Lepisosteus oculatus	74.85	0.00e+00	1138.00
IUUC-Mtr-058103	Medicago truncatula	27.94	2.00e-05	43.90
IUUC-Mla-059141	Melampsora laricipopulina	23.83	5.00e-15	76.30
IUUC-Mmr-060595	Microcebus murinus	28.14	4.00e-23	103.00
IUUC-Ncr-068674	Neurospora crassa	29.57	2.00e-09	58.20
IUUC-Oba-075285	Oryza barthii	22.92	4.00e-05	43.10
IUUC-Obr-076433	Oryza brachyantha	23.90	1.00e-05	45.10
IUUC-Ogl-077044	Oryza glaberrima	22.92	4.00e-05	43.10
IUUC-Ogu-078868	Oryza glumaepatula	22.92	4.00e-05	43.10
IUUC-Oin-079737	Oryza indica	22.92	4.00e-05	43.90
IUUC-Olo-080337	Oryza longistaminata	22.92	7.00e-05	43.10
IUUC-Oni-082197	Oryza nivara	22.92	4.00e-05	43.10
IUUC-Opu-083815	Oryza punctata	22.15	6.00e-05	42.40
IUUC-Oru-085246	Oryza rufipogon	22.92	4.00e-05	43.10
IUUC-Osa-086082	Oryza sativa	22.92	4.00e-05	43.10
IUUC-Ola-087406	Oryzias latipes	28.65	3.00e-12	67.40
IUUC-Olu-087728	Ostreococcus lucimarinus	26.92	1.70e-02	34.30
IUUC-Pno-094933	Phaeosphaeria nodorum	25.83	5.00e-07	49.70
IUUC-Ppa-096027	Physcomitrella patens	29.20	8.00e-07	48.90
IUUC-Pfo-097294	Poecilia formosa	27.78	2.00e-19	90.90
IUUC-Pab-098372	Pongo abelii	66.67	0.00e+00	947.00
IUUC-Pop-098996	Populus trichocarpa	26.60	8.00e-07	48.50
IUUC-Ptt-104003	Puccinia triticina	24.46	1.50e-02	34.70
IUUC-Pte-104256	Pyrenophora teres	26.02	5.00e-07	50.10
IUUC-Pyt-104720	Pyrenophora triticirepentis	25.42	1.00e-05	44.30
IUUC-Sit-110147	Setaria italica	21.71	2.00e-04	41.20
IUUC-Sly-111689	Solanum lycopersicum	25.52	3.00e-06	46.60
IUUC-Stu-112186	Solanum tuberosum	25.52	3.00e-06	46.60
IUUC-Sbi-114752	Sorghum bicolor	21.16	3.00e-04	40.40
IUUC-Sre-115199	Sporisorium reilianum	24.65	1.00e-13	72.80
IUUC-Ssc-116398	Sus scrofa	66.59	0.00e+00	945.00
IUUC-Tgu-116824	Taeniopygia guttata	28.14	1.00e-22	101.00
IUUC-Tca-121863	Theobroma cacao	26.47	2.00e-05	44.30
IUUC-Tae-125101	Triticum aestivum	22.92	5.00e-06	45.80
IUUC-Tur-126006	Triticum urartu	22.92	2.00e-05	44.30
IUUC-Tbe-127395	Tupaia belangeri	27.12	1.00e-16	80.90
IUUC-Uma-129653	Ustilago maydis	24.19	3.00e-12	68.20
IUUC-Vpa-130784	Vicugna pacos	27.68	3.00e-16	80.50
IUUC-Vvi-131286	Vitis vinifera	25.52	5.00e-05	42.70
IUUC-Xma-134125	Xiphophorus maculatus	27.78	2.00e-19	91.30
IUUC-Zma-135630	Zea mays	20.39	4.00e-04	39.70

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence