iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114050

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000769

Gene Name

SORBI_010G086400

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb10g007490	Sb10g007490.1	Sb10g007490.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.10e-08	36.2	160	202

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl++f  ++++++lp C H+fh dC+  w        ++ +CP+Cr
   Q: 160  CAVCLSEFedDEELRLLPsCSHAFHPDCIGEW------LAGHVTCPVCR 202
           ********77556***99**************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MTTTPRHHAA SSPPLAVLTL LLLLLLLLDT PAAAQQQSPS RDKDNGGGAV GGGGESMPGQ 60
SPSFSAPMIV LLVALIAAFF FIGFFSVYMR RCGRGAPAGP GIPAAALLAL SRQEQRDRDQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACGACGA CGCCTCGCCA CCATGCGGCG TCGTCGCCGC CGCTCGCCGT GCTCACGCTG 60
CTACTGCTAC TGCTGCTGCT GCTCGACACC CCCGCCGCCG CGCAGCAGCA GAGCCCGTCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

sbi:SORBI_10g007540

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-015047	Brachypodium distachyon	52.53	4.00e-51	194.00
IUUC-Lpe-050753	Leersia perrieri	63.66	5.00e-68	250.00
IUUC-Oba-075947	Oryza barthii	66.94	3.00e-52	198.00
IUUC-Ogl-077214	Oryza glaberrima	64.16	1.00e-64	239.00
IUUC-Ogu-078539	Oryza glumaepatula	64.16	4.00e-65	241.00
IUUC-Oin-079505	Oryza indica	63.69	2.00e-64	238.00
IUUC-Ome-081725	Oryza meridionalis	61.92	3.00e-63	234.00
IUUC-Oru-084684	Oryza rufipogon	63.01	2.00e-64	239.00
IUUC-Osa-085939	Oryza sativa	77.97	2.00e-43	169.00
IUUC-Sit-109902	Setaria italica	67.02	2.00e-84	305.00
IUUC-Tae-123264	Triticum aestivum	59.47	3.00e-84	304.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence