iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ogu-078268

Ensembl Protein ID

OGLUM06G10000.1

UniProt Accession

A0A0E0A7K1; A0A0E0A7K1_9ORYZ

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OGLUM06G10000	OGLUM06G10000.1	OGLUM06G10000.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.50e-32	112.6	38	109

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           vp+ f+CpIsle+MrdPv++p+Gitydr+s+e wla+g+ tcPvt++p++  dlvPn++ rr+iq+wc +n+
   Q: 38   VPANFVCPISLEMMRDPVTAPTGITYDRESVEGWLARGHDTCPVTGRPVRLADLVPNHATRRMIQDWCVANR 109
           8*******************************************************************9997 PP

Organism

Oryza glumaepatula

Protein Sequence
(Fasta)

MSRATRVAGR LMPEISLLRR GRKSAARGGD DAEVEVSVPA NFVCPISLEM MRDPVTAPTG 60
ITYDRESVEG WLARGHDTCP VTGRPVRLAD LVPNHATRRM IQDWCVANRA RGVERVPTPR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCTCGCG CGACGAGGGT GGCCGGGAGG CTGATGCCAG AGATATCGTT GCTGAGACGG 60
GGGAGGAAGT CGGCGGCGAG AGGCGGCGAC GATGCGGAGG TGGAGGTGTC GGTGCCGGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007692	Arabidopsis thaliana	40.24	1.00e-62	233.00
IUUC-Bdi-014644	Brachypodium distachyon	74.07	1.00e-157	548.00
IUUC-Bra-017285	Brassica rapa	39.05	3.00e-66	244.00
IUUC-Gma-043233	Glycine max	44.85	4.00e-78	284.00
IUUC-Lpe-050701	Leersia perrieri	81.32	1.00e-159	555.00
IUUC-Mtr-058526	Medicago truncatula	39.09	4.00e-74	271.00
IUUC-Oba-075106	Oryza barthii	76.69	3.00e-81	295.00
IUUC-Ogl-077061	Oryza glaberrima	98.89	0.00e+00	650.00
IUUC-Oin-079382	Oryza indica	99.55	1.00e-179	621.00
IUUC-Oni-082958	Oryza nivara	99.55	0.00e+00	641.00
IUUC-Opu-083563	Oryza punctata	82.26	1.00e-130	458.00
IUUC-Oru-085171	Oryza rufipogon	100.00	8.00e-128	451.00
IUUC-Osa-086217	Oryza sativa	99.78	9.00e-180	622.00
IUUC-Sit-109975	Setaria italica	79.56	2.00e-121	428.00
IUUC-Sbi-113869	Sorghum bicolor	74.24	2.00e-104	371.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence