iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Oba-075004

Ensembl Protein ID

OBART06G10630.1

UniProt Accession

A0A0D3GFA2; A0A0D3GFA2_9ORYZ

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OBART06G10630	OBART06G10630.1	OBART06G10630.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.00e-19	71.3	215	291

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggk.....tcPvtrqplteedlvPnltlrrliqawceens 73
           +++ f Cp+++++M dPv+++sG+tydr++Ie+++++         cPvt+ +++++ l  n  l+++i +w+ +n+
   Q: 215  LYDSFFCPLTNKVMVDPVTTESGVTYDRKAIEEYFEKFADgsepvVCPVTKMSMQSKALRSNVPLKSTIAEWIMRNE 291
           5799*******************************666666679****************************99886 PP

Organism

Oryza barthii

Protein Sequence
(Fasta)

MQRSGAQARK ASLVESIEAA ISELMPPEAA ADAEHENFMD VGSHLYHAPL ATMELQRAQN 60
STVNVMHVME YLAANVDLAK DLVMRCSAVA QELKNDDLLG MTEDLDSVIK NIGHELSRIP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCAGGTAA GCGTGGGGGA GTTGAGCTTT GCTGTTTGCT GCATCTCTCT TTTGCGGGGG 60
ACGAAGCTGG TTTTGCTCGT TTGCTGCTAA TTCGTAGCGC TGCCATAAAT TTGGGTAGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002664	Amborella trichopoda	40.84	0.00e+00	660.00
IUUC-Aly-006424	Arabidopsis lyrata	43.06	0.00e+00	658.00
IUUC-Ath-006596	Arabidopsis thaliana	42.70	1.00e-176	613.00
IUUC-Bdi-014572	Brachypodium distachyon	79.67	0.00e+00	1504.00
IUUC-Bol-016179	Brassica oleracea	43.77	0.00e+00	646.00
IUUC-Bra-017617	Brassica rapa	43.77	0.00e+00	644.00
IUUC-Hvu-047800	Hordeum vulgare	78.47	0.00e+00	1516.00
IUUC-Lpe-050817	Leersia perrieri	92.45	0.00e+00	1860.00
IUUC-Mac-065538	Musa acuminata	47.67	0.00e+00	782.00
IUUC-Obr-076090	Oryza brachyantha	93.79	0.00e+00	1493.00
IUUC-Ogl-077375	Oryza glaberrima	100.00	0.00e+00	2007.00
IUUC-Ogu-078488	Oryza glumaepatula	99.42	0.00e+00	1987.00
IUUC-Oin-079369	Oryza indica	97.47	0.00e+00	1795.00
IUUC-Olo-080901	Oryza longistaminata	98.36	0.00e+00	1663.00
IUUC-Ome-081243	Oryza meridionalis	97.38	0.00e+00	1948.00
IUUC-Oni-082268	Oryza nivara	99.22	0.00e+00	1985.00
IUUC-Opu-083388	Oryza punctata	95.64	0.00e+00	1943.00
IUUC-Oru-084387	Oryza rufipogon	99.22	0.00e+00	1988.00
IUUC-Osa-086255	Oryza sativa	97.45	0.00e+00	1858.00
IUUC-Pop-099123	Populus trichocarpa	41.62	0.00e+00	712.00
IUUC-Ppe-101776	Prunus persica	44.11	0.00e+00	745.00
IUUC-Sit-110322	Setaria italica	81.03	0.00e+00	1558.00
IUUC-Sly-111047	Solanum lycopersicum	41.54	0.00e+00	744.00
IUUC-Stu-112113	Solanum tuberosum	41.17	0.00e+00	708.00
IUUC-Sbi-113818	Sorghum bicolor	79.15	0.00e+00	1483.00
IUUC-Tca-121365	Theobroma cacao	45.09	0.00e+00	799.00
IUUC-Tae-123677	Triticum aestivum	77.98	0.00e+00	1492.00
IUUC-Tur-126161	Triticum urartu	77.87	0.00e+00	1465.00
IUUC-Vvi-131502	Vitis vinifera	46.57	0.00e+00	687.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence