iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ata-000814

Ensembl Protein ID

EMT06471

UniProt Accession

M8API7; M8API7_AEGTA

Genbank Protein ID

EMT06471.1

Protein Name

RING-H2 finger protein ATL1M

Genbank Nucleotide ID

KD579515

Gene Name

F775_16631

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
F775_16631	EMT06471	EMT06471

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	9.60e-06	26.8	84	126

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf....kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl  +    +   ++lp C Hv+h +C+  w         + +CPlCr
   Q: 84   CAVCLAAIrvgaM--AKLLPaCAHVYHVECIDLW------LASHSTCPLCR 126
           9999998844321..557889*************......**********8 PP

Organism

Aegilops tauschii

Protein Sequence
(Fasta)

MSPDSLLLFY AVAAAVTAAF GLFSLYKHLL RRRRHNPRAE APDGDPEERL PLAVITVASS 60
LLPPFMYNRL VRHSGKDDAG SAECAVCLAA IRVGAMAKLL PACAHVYHVE CIDLWLASHS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCGCCCG ACAGCCTCCT CCTCTTCTAC GCCGTCGCGG CGGCCGTCAC CGCCGCCTTC 60
GGCCTCTTCT CGCTGTACAA GCACCTCTTG CGCCGCCGGC GGCACAACCC CCGCGCGGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0472--Membrane
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

ats:F775_16631

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Hvu-047214	Hordeum vulgare	87.59	2.00e-62	230.00
IUUC-Lpe-051714	Leersia perrieri	70.21	3.00e-15	73.60
IUUC-Oba-075497	Oryza barthii	58.78	2.00e-34	140.00
IUUC-Obr-076698	Oryza brachyantha	61.11	8.00e-33	131.00
IUUC-Ogl-077042	Oryza glaberrima	58.78	4.00e-36	142.00
IUUC-Ogu-078630	Oryza glumaepatula	57.05	5.00e-34	135.00
IUUC-Oin-079284	Oryza indica	58.11	2.00e-30	124.00
IUUC-Ome-081284	Oryza meridionalis	56.76	6.00e-34	135.00
IUUC-Opu-083390	Oryza punctata	58.78	3.00e-36	143.00
IUUC-Oru-084930	Oryza rufipogon	59.46	1.00e-30	127.00
IUUC-Osa-085428	Oryza sativa	59.46	8.00e-32	128.00
IUUC-Sit-109739	Setaria italica	53.42	4.00e-31	126.00
IUUC-Sbi-113968	Sorghum bicolor	73.91	1.00e-24	104.00
IUUC-Tae-123801	Triticum aestivum	88.97	2.00e-65	241.00
IUUC-Tur-126061	Triticum urartu	88.28	3.00e-65	239.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence