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Tag Content
iUUCD ID IUUC-Stu-112018
Ensembl Protein ID PGSC0003DMT400017459
UniProt Accession M1A8Z1; M1A8Z1_SOLTU
Protein Name Uncharacterized protein
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
PGSC0003DMG400006784 PGSC0003DMT400017459 PGSC0003DMT400017459
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 1.40e-30 105.3 555 586
UBD/Beta-Prp 2.80e-74 251.2 183 506
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDl 30
    gH+d++t+++f d + l+++s Dgt+++WD+
   Q: 555 GHSDRITDMCFsEDgKWLLTSSMDGTLRIWDV 586
    8**********955699**************6 PP
   


   UBD/Beta-Prp

   S: 12   vitcvkfspdksllatgsrdgtikvwdvttgkllrsl.sgheaevtavkfspdgk.ilvtgseDrtikvwdlstgkcvhtlk.ghedsv 97
    itc sp +++a+g++dg+i v++++ ++s+ + ++v+a++fs dg+ +l++g++ ++i +w+l+++ +++k +h++s+
   Q: 183 SITCCVSSPALDVIAVGCADGKIHVHNIRYDEEVASFsHSTRGAVNALSFSTDGQpLLASGGSSGVISIWNLEKRRLHSVIKeAHDSSI 271
    57777778*****************************7777889**********99*************************989***** PP
   S: 98 lslsfspsgdklvsGshdrtirvwdletgqclee...tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgght.ds 182
    +sl+f+++ +l s s+d+ ++w +t + sgh++ c+++ +g+ + s++ Dr+ rl+++ +++ r+l++ h ++
   Q: 272 VSLQFFANEPVLMSSSADNSMKMWIFDTSDGEPRllrFRSGHSAPPLCIKFYANGRHILSAGQDRAFRLFSVVQDQQSRELSQRHVsKR 360
    ***********************98888776666667********************************************77675267 PP
   S: 183 vyslsfdsng...................kelvsgsldg.tvklwdlq....tgecvrtlnghtdnvksvrfspnderlvsgssDgsir 247
    ++l+++++ +v++ +d+ + +w lq ++++ + + ++vk + s +++ v g++ g i
   Q: 361 AKKLKLKKEEiklkpviafdvaeirerdwCNVVTCHMDTpRAYVWRLQnfvlGEHILTPCPENPTPVKACAISACGNFAVLGTAGGWIE 449
    899999998899999999999999999999********96799*****99988889999****************************** PP
   S: 248 iWdlrs....gdllktlqlhn....ssvisvavlsfgdnvlvlgsedskvniwklkkn 297
    ++l+s g+++ +l+++ vi +a+ + ++ ++++++ ++v++w++k
   Q: 450 RFNLQSgisrGNYVDALEGESaahnGEVIGIAC-DATNTIMISAGYHGDVKVWDFKCR 506
    *9777622225777777776677779*******.*********************875 PP
   

Organism Solanum tuberosum
Protein Sequence
(Fasta)
MGIFEPFRAI GYITTNVPFS VQRLGTETFV TVSVGKAFQV YNCAKLSLVL VGPQLPKKIR 60
ALASYREYTF AAYGSDIAVV KRAHQVATWS GHSAKVNQLL IFGEHVLSVD VEGNIFIWQF 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Stu-112018|E3,WD_repeat;UBD,Beta-Prp|Solanum tuberosum
Please wait for a moment...
Nucleotide Sequence
(Fasta)
AGTTGAGCGT GTGCATCCAA CTAGGGTTTA AGCTTCACTT CTAAAACCCT TGTGTGCAGA 60
ATAACCTATA AGCTTTACCA GCGCTTCAAT TTTCTGGGCG CCAAAAGCTT CAAAGTTTGT 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Stu-112018|E3,WD_repeat;UBD,Beta-Prp|Solanum tuberosum
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR027295--Quinoprotein_ADH-like_fam
IPR007319--SSU_processome_Utp21
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF04192--Utp21
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0032040--C:small-subunit processome
GO:0006364--P:rRNA processing

KEGG sot:102578407
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-001096 Aegilops tauschii 69.98 0.00e+00 1248.00
IUUC-Aml-002289 Ailuropoda melanoleuca 35.03 1.00e-149 523.00
IUUC-Atr-002859 Amborella trichopoda 70.47 0.00e+00 1207.00
IUUC-Apl-003505 Anas platyrhynchos 36.07 8.00e-143 499.00
IUUC-Aca-004339 Anolis carolinensis 35.40 2.00e-149 522.00
IUUC-Aly-005913 Arabidopsis lyrata 73.88 0.00e+00 1348.00
IUUC-Ath-006767 Arabidopsis thaliana 73.30 0.00e+00 1355.00
IUUC-Ago-007763 Ashbya gossypii 31.11 5.00e-120 424.00
IUUC-Acl-008275 Aspergillus clavatus 29.82 2.00e-77 282.00
IUUC-Afl-008457 Aspergillus flavus 31.65 8.00e-78 283.00
IUUC-Afu-008914 Aspergillus fumigatus 29.19 7.00e-82 297.00
IUUC-Ani-009225 Aspergillus nidulans 29.91 3.00e-88 318.00
IUUC-Aor-010046 Aspergillus oryzae 29.95 3.00e-103 368.00
IUUC-Ate-010337 Aspergillus terreus 28.46 1.00e-95 343.00
IUUC-Ame-010963 Astyanax mexicanus 36.01 6.00e-151 526.00
IUUC-Bgr-011973 Blumeria graminis 31.44 2.00e-67 249.00
IUUC-Bta-012462 Bos taurus 35.57 1.00e-150 526.00
IUUC-Bci-013940 Botrytis cinerea 30.21 2.00e-117 415.00
IUUC-Bdi-014725 Brachypodium distachyon 69.80 0.00e+00 1306.00
IUUC-Bol-016534 Brassica oleracea 73.55 0.00e+00 1342.00
IUUC-Bra-016781 Brassica rapa 71.35 0.00e+00 1300.00
IUUC-Cel-018581 Caenorhabditis elegans 26.60 8.00e-83 300.00
IUUC-Cja-019675 Callithrix jacchus 34.16 5.00e-157 547.00
IUUC-Cfa-020118 Canis familiaris 35.03 3.00e-150 524.00
IUUC-Cpo-021798 Cavia porcellus 34.73 4.00e-148 517.00
IUUC-Cre-022566 Chlamydomonas reinhardtii 33.24 1.00e-48 186.00
IUUC-Csa-023547 Chlorocebus sabaeus 34.49 2.00e-146 511.00
IUUC-Cho-024518 Choloepus hoffmanni 32.95 2.00e-52 200.00
IUUC-Cin-025339 Ciona intestinalis 33.37 5.00e-146 510.00
IUUC-Cgl-026476 Colletotrichum gloeosporioides 29.37 8.00e-102 363.00
IUUC-Cne-026859 Cryptococcus neoformans 33.88 2.00e-134 472.00
IUUC-Cme-027173 Cyanidioschyzon merolae 27.58 2.00e-84 305.00
IUUC-Dre-027733 Danio rerio 35.75 4.00e-150 524.00
IUUC-Dno-029439 Dasypus novemcinctus 35.44 5.00e-146 510.00
IUUC-Dor-030329 Dipodomys ordii 33.96 1.00e-66 247.00
IUUC-Dse-031511 Dothistroma septosporum 28.15 3.00e-90 325.00
IUUC-Dme-031694 Drosophila melanogaster 32.91 8.00e-132 463.00
IUUC-Ete-032930 Echinops telfairi 34.54 6.00e-126 444.00
IUUC-Eca-033302 Equus caballus 35.06 8.00e-147 513.00
IUUC-Eeu-034516 Erinaceus europaeus 34.63 6.00e-156 543.00
IUUC-Fca-036064 Felis catus 35.24 1.00e-148 519.00
IUUC-Fal-037024 Ficedula albicollis 36.55 3.00e-159 554.00
IUUC-Fox-037787 Fusarium oxysporum 30.16 1.00e-99 356.00
IUUC-Fso-038378 Fusarium solani 30.41 5.00e-102 364.00
IUUC-Gmo-039637 Gadus morhua 36.17 3.00e-80 291.00
IUUC-Ggr-040108 Gaeumannomyces graminis 29.51 3.00e-99 355.00
IUUC-Gga-040982 Gallus gallus 35.19 4.00e-164 571.00
IUUC-Gac-041565 Gasterosteus aculeatus 35.33 1.00e-139 489.00
IUUC-Gma-043185 Glycine max 75.96 0.00e+00 1388.00
IUUC-Ggo-045463 Gorilla gorilla 34.30 6.00e-148 517.00
IUUC-Hsa-045675 Homo sapiens 34.38 1.00e-149 523.00
IUUC-Hvu-047352 Hordeum vulgare 69.01 0.00e+00 1154.00
IUUC-Itr-048088 Ictidomys tridecemlineatus 34.49 2.00e-158 551.00
IUUC-Kpa-049164 Komagataella pastoris 30.88 3.00e-110 391.00
IUUC-Lch-050476 Latimeria chalumnae 35.69 2.00e-161 561.00
IUUC-Lpe-051556 Leersia perrieri 64.19 0.00e+00 913.00
IUUC-Loc-052820 Lepisosteus oculatus 34.64 2.00e-152 532.00
IUUC-Lma-052961 Leptosphaeria maculans 30.26 4.00e-47 182.00
IUUC-Laf-054006 Loxodonta africana 33.80 2.00e-138 485.00
IUUC-Mcc-055037 Macaca mulatta 34.16 1.00e-148 519.00
IUUC-Mor-057280 Magnaporthe oryzae 29.58 8.00e-101 360.00
IUUC-Mpo-057408 Magnaporthe poae 29.40 5.00e-96 344.00
IUUC-Mtr-058473 Medicago truncatula 75.70 0.00e+00 1378.00
IUUC-Mla-058892 Melampsora laricipopulina 33.90 5.00e-112 397.00
IUUC-Mga-059598 Meleagris gallopavo 31.72 1.00e-115 409.00
IUUC-Mvi-060334 Microbotryum violaceum 32.95 1.00e-110 393.00
IUUC-Mmr-061239 Microcebus murinus 34.31 1.00e-146 512.00
IUUC-Mdo-062471 Monodelphis domestica 35.69 2.00e-143 502.00
IUUC-Mmu-063872 Mus musculus 35.42 9.00e-156 543.00
IUUC-Mac-064631 Musa acuminata 71.72 0.00e+00 1178.00
IUUC-Mpu-066039 Mustela putorius furo 34.81 1.00e-160 559.00
IUUC-Mlu-067485 Myotis lucifugus 34.95 1.00e-148 519.00
IUUC-Nfi-068319 Neosartorya fischeri 28.38 5.00e-97 348.00
IUUC-Ncr-068725 Neurospora crassa 30.32 5.00e-108 384.00
IUUC-Nle-069050 Nomascus leucogenys 34.27 3.00e-149 521.00
IUUC-Opr-070437 Ochotona princeps 32.61 3.00e-44 172.00
IUUC-Ont-071574 Oreochromis niloticus 34.67 2.00e-144 505.00
IUUC-Oan-072826 Ornithorhynchus anatinus 36.56 2.00e-159 555.00
IUUC-Ocu-073995 Oryctolagus cuniculus 34.81 2.00e-142 498.00
IUUC-Oba-075407 Oryza barthii 63.02 0.00e+00 1123.00
IUUC-Obr-076451 Oryza brachyantha 70.85 0.00e+00 1323.00
IUUC-Ogl-077535 Oryza glaberrima 70.10 0.00e+00 1302.00
IUUC-Ogu-077995 Oryza glumaepatula 62.11 0.00e+00 1122.00
IUUC-Oin-079431 Oryza indica 70.48 0.00e+00 1310.00
IUUC-Olo-080495 Oryza longistaminata 61.69 0.00e+00 1099.00
IUUC-Oni-082336 Oryza nivara 67.61 0.00e+00 1229.00
IUUC-Opu-084028 Oryza punctata 64.95 0.00e+00 1107.00
IUUC-Oru-084500 Oryza rufipogon 62.28 0.00e+00 1120.00
IUUC-Osa-086242 Oryza sativa 70.35 0.00e+00 1313.00
IUUC-Ola-086612 Oryzias latipes 34.83 3.00e-114 404.00
IUUC-Olu-087703 Ostreococcus lucimarinus 35.84 6.00e-154 536.00
IUUC-Oga-088572 Otolemur garnettii 35.24 8.00e-149 520.00
IUUC-Oar-090363 Ovis aries 35.88 3.00e-153 535.00
IUUC-Ptr-090477 Pan troglodytes 34.31 6.00e-148 517.00
IUUC-Pan-092914 Papio anubis 34.16 1.00e-149 522.00
IUUC-Psi-093019 Pelodiscus sinensis 34.92 2.00e-150 525.00
IUUC-Pma-094303 Petromyzon marinus 33.75 3.00e-128 451.00
IUUC-Pno-094938 Phaeosphaeria nodorum 31.33 2.00e-45 177.00
IUUC-Ppa-095720 Physcomitrella patens 54.79 0.00e+00 1009.00
IUUC-Pfo-097034 Poecilia formosa 34.75 2.00e-135 475.00
IUUC-Pab-097669 Pongo abelii 34.27 7.00e-149 520.00
IUUC-Pop-098835 Populus trichocarpa 76.32 0.00e+00 1406.00
IUUC-Pca-101097 Procavia capensis 37.60 2.00e-60 226.00
IUUC-Ppe-101430 Prunus persica 77.86 0.00e+00 1469.00
IUUC-Pva-103152 Pteropus vampyrus 34.70 8.00e-152 530.00
IUUC-Pgr-103517 Puccinia graminis 31.22 7.00e-127 447.00
IUUC-Ptt-103697 Puccinia triticina 31.99 1.00e-96 346.00
IUUC-Pte-104121 Pyrenophora teres 31.23 6.00e-51 195.00
IUUC-Pyt-104672 Pyrenophora triticirepentis 30.56 2.00e-50 193.00
IUUC-Rno-105435 Rattus norvegicus 34.96 3.00e-151 528.00
IUUC-Sce-106202 Saccharomyces cerevisiae 31.52 4.00e-104 371.00
IUUC-Sha-107272 Sarcophilus harrisii 36.03 3.00e-140 491.00
IUUC-Sja-107744 Schizosaccharomyces japonicus 36.43 1.00e-151 529.00
IUUC-Spo-108256 Schizosaccharomyces pombe 36.29 3.00e-148 518.00
IUUC-Ssl-108618 Sclerotinia sclerotiorum 29.28 6.00e-111 394.00
IUUC-Smo-108762 Selaginella moellendorffii 55.39 0.00e+00 1021.00
IUUC-Sit-110051 Setaria italica 69.71 0.00e+00 1294.00
IUUC-Sly-111181 Solanum lycopersicum 97.46 0.00e+00 1710.00
IUUC-Sar-113348 Sorex araneus 34.22 3.00e-101 362.00
IUUC-Sbi-114282 Sorghum bicolor 70.11 0.00e+00 1316.00
IUUC-Sre-114946 Sporisorium reilianum 30.09 3.00e-85 309.00
IUUC-Ssc-115287 Sus scrofa 35.53 4.00e-152 531.00
IUUC-Tgu-117138 Taeniopygia guttata 34.84 3.00e-130 457.00
IUUC-Tru-118232 Takifugu rubripes 34.14 3.00e-136 478.00
IUUC-Tsy-119502 Tarsius syrichta 28.39 3.00e-101 362.00
IUUC-Tni-120378 Tetraodon nigroviridis 36.72 4.00e-136 478.00
IUUC-Tca-121506 Theobroma cacao 76.79 0.00e+00 1403.00
IUUC-Tre-122166 Trichoderma reesei 30.13 2.00e-110 392.00
IUUC-Tvi-122385 Trichoderma virens 30.00 1.00e-110 393.00
IUUC-Tae-122836 Triticum aestivum 70.19 0.00e+00 1329.00
IUUC-Tur-126490 Triticum urartu 60.23 0.00e+00 1011.00
IUUC-Tme-127157 Tuber melanosporum 32.68 1.00e-114 406.00
IUUC-Tbe-127981 Tupaia belangeri 37.22 6.00e-129 453.00
IUUC-Ttr-128886 Tursiops truncatus 34.49 1.00e-145 509.00
IUUC-Uma-129439 Ustilago maydis 30.43 8.00e-94 337.00
IUUC-Vda-129760 Verticillium dahliae 29.98 7.00e-112 397.00
IUUC-Vpa-130456 Vicugna pacos 35.06 1.00e-151 529.00
IUUC-Vvi-131086 Vitis vinifera 78.83 0.00e+00 1462.00
IUUC-Xtr-131829 Xenopus tropicalis 36.02 4.00e-166 577.00
IUUC-Xma-133588 Xiphophorus maculatus 34.39 2.00e-133 468.00
IUUC-Yli-134328 Yarrowia lipolytica 32.02 9.00e-104 370.00
IUUC-Zma-135808 Zea mays 68.80 0.00e+00 1298.00
Created Date 25-Jun-2017

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