iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ata-000261

Ensembl Protein ID

EMT08674

UniProt Accession

M8BPH0; M8BPH0_AEGTA

Genbank Protein ID

EMT08674.1

Protein Name

Transcription initiation factor TFIID subunit 5

Genbank Nucleotide ID

KD567070

Gene Name

F775_02530

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
F775_02530	EMT08674	EMT08674

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.50e-36	121.8	486	519
UBD/Beta-Prp	1.10e-56	193.0	301	535

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrt 32
           gH++ v++laf  +  ll+sGs D+t+k+WD+ +
   Q: 486  GHNSCVWSLAFsCEgALLASGSADCTVKLWDVAS 519
           8**********855689**************865 PP

UBD/Beta-Prp

   S: 48   lsgheaevtavkfspdgkilvtgseDrtikvwdls...............tgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetl 133
           + +  ++ ++ ++s+dg++ v g +D  +kvwd+                 +  ++ +kgh++ v++++fsp g++++s+shdrt+r+w +++ q l+ + 
   Q: 301  FLNTHNGLNCSSISNDGSMVVGGFSDSSVKVWDMAkigqpaktfrlwstkLNANLVCYKGHNYPVWDVQFSPVGHYFASASHDRTARIWSMDKIQPLR-IM 400
           56667799************************999999999999999888888899999***************************************.** PP
   S: 134  sghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnd 234
           +gh + v cv++h ++n++++Gs D+tvrlWd++tg+++r + g h ++v sl+++++g++++sg++dgt+ +wdl+tg+cv  l gh++ v+s++fs ++
   Q: 401  AGHLADVDCVQWHVNCNYIATGSSDKTVRLWDVQTGECIRMFIG-HRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTGRCVSPLAGHNSCVWSLAFSCEG 500
           *******************************************9.******************************************************** PP
   S: 235  erlvsgssDgsiriWdlrsgdllktlqlhn....s 265
            +l+sgs+D ++++Wd+ s++   ++  ++    +
   Q: 501  ALLASGSADCTVKLWDVASSTKALKMDDTKagstN 535
           ****************9999888777776655551 PP

Organism

Aegilops tauschii

Protein Sequence
(Fasta)

MFPFVDRPDN DPARYYDGYN KLRSWAYNSL DQYKHELLRV LYPAFIHCFM DLVSEGHTLE 60
ARAFFLKFRE DHELMHSRDL QKLEGTLSPL HLEEMDLARS LRENKFRIKL CEYSYELLLQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTTCCCCT TTGTTGACAG GCCGGATAAC GACCCAGCAA GATACTATGA TGGCTACAAC 60
AAGCTAAGAT CATGGGCATA CAATTCTCTG GACCAATACA AGGTGTGCTA CATTAAGTGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0396--Initiation factor
KW-0433--Leucine-rich repeat
KW-0648--Protein biosynthesis
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR032675--L_dom-like
IPR001611--Leu-rich_rpt
IPR003591--Leu-rich_rpt_typical-subtyp
IPR013210--LRR_N_plant-typ
IPR007582--TFIID_NTD2
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF13855--LRR_8
PF08263--LRRNT_2
PF04494--TFIID_NTD2
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00369--LRR_TYP
SM00320--WD40

Gene Ontology

GO:0003743--F:translation initiation factor activity

KEGG

ats:F775_02530

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003136	Amborella trichopoda	48.17	2.00e-143	502.00
IUUC-Ago-007736	Ashbya gossypii	33.03	7.00e-91	327.00
IUUC-Acl-008092	Aspergillus clavatus	29.09	5.00e-74	271.00
IUUC-Afl-008659	Aspergillus flavus	28.92	3.00e-73	269.00
IUUC-Afu-008902	Aspergillus fumigatus	50.55	2.00e-53	203.00
IUUC-Ani-009462	Aspergillus nidulans	28.32	8.00e-64	237.00
IUUC-Aor-010083	Aspergillus oryzae	28.92	3.00e-73	269.00
IUUC-Ate-010271	Aspergillus terreus	42.68	8.00e-55	207.00
IUUC-Ame-010721	Astyanax mexicanus	39.18	2.00e-71	263.00
IUUC-Bgr-012257	Blumeria graminis	28.95	2.00e-65	243.00
IUUC-Bci-013737	Botrytis cinerea	37.60	8.00e-49	187.00
IUUC-Bdi-015041	Brachypodium distachyon	79.87	0.00e+00	878.00
IUUC-Cpo-021454	Cavia porcellus	34.77	6.00e-87	314.00
IUUC-Cre-022736	Chlamydomonas reinhardtii	42.22	8.00e-43	167.00
IUUC-Cho-024638	Choloepus hoffmanni	49.26	3.00e-57	215.00
IUUC-Cgl-026392	Colletotrichum gloeosporioides	26.36	2.00e-43	169.00
IUUC-Cne-026876	Cryptococcus neoformans	50.00	1.00e-54	207.00
IUUC-Dse-031547	Dothistroma septosporum	44.40	1.00e-56	213.00
IUUC-Ete-032712	Echinops telfairi	47.00	3.00e-58	218.00
IUUC-Eeu-034449	Erinaceus europaeus	54.87	2.00e-63	236.00
IUUC-Fox-038049	Fusarium oxysporum	39.88	2.00e-36	147.00
IUUC-Fso-038302	Fusarium solani	31.37	4.00e-40	159.00
IUUC-Ggr-039878	Gaeumannomyces graminis	26.82	5.00e-47	182.00
IUUC-Hvu-047695	Hordeum vulgare	80.67	0.00e+00	659.00
IUUC-Kpa-049402	Komagataella pastoris	40.38	2.00e-70	259.00
IUUC-Lch-050501	Latimeria chalumnae	51.28	3.00e-57	215.00
IUUC-Lpe-051560	Leersia perrieri	57.78	5.00e-169	587.00
IUUC-Meu-056182	Macropus eugenii	49.26	3.00e-57	215.00
IUUC-Mor-057024	Magnaporthe oryzae	26.30	3.00e-45	176.00
IUUC-Mpo-057520	Magnaporthe poae	26.90	4.00e-47	182.00
IUUC-Mla-058881	Melampsora laricipopulina	51.40	1.00e-56	213.00
IUUC-Mga-059776	Meleagris gallopavo	33.33	1.00e-84	306.00
IUUC-Mvi-060208	Microbotryum violaceum	42.38	1.00e-66	247.00
IUUC-Mac-064886	Musa acuminata	72.16	1.00e-127	450.00
IUUC-Nfi-068502	Neosartorya fischeri	42.17	6.00e-54	204.00
IUUC-Ncr-068891	Neurospora crassa	26.92	8.00e-44	171.00
IUUC-Oba-075739	Oryza barthii	73.14	0.00e+00	798.00
IUUC-Obr-076111	Oryza brachyantha	77.25	0.00e+00	889.00
IUUC-Ogl-077914	Oryza glaberrima	73.70	0.00e+00	841.00
IUUC-Ogu-078057	Oryza glumaepatula	72.07	0.00e+00	764.00
IUUC-Oin-079473	Oryza indica	75.33	0.00e+00	855.00
IUUC-Olo-080557	Oryza longistaminata	75.32	0.00e+00	803.00
IUUC-Ome-081831	Oryza meridionalis	74.56	0.00e+00	768.00
IUUC-Oni-082431	Oryza nivara	76.91	0.00e+00	864.00
IUUC-Opu-083325	Oryza punctata	72.24	0.00e+00	807.00
IUUC-Oru-085131	Oryza rufipogon	71.33	0.00e+00	755.00
IUUC-Osa-086189	Oryza sativa	75.17	0.00e+00	852.00
IUUC-Olu-087616	Ostreococcus lucimarinus	35.06	3.00e-102	365.00
IUUC-Pma-094593	Petromyzon marinus	35.60	1.00e-46	180.00
IUUC-Pno-094823	Phaeosphaeria nodorum	29.70	3.00e-66	245.00
IUUC-Ppa-095455	Physcomitrella patens	43.39	8.00e-129	453.00
IUUC-Pop-099134	Populus trichocarpa	49.92	1.00e-157	548.00
IUUC-Pca-100727	Procavia capensis	40.32	2.00e-59	222.00
IUUC-Pgr-103603	Puccinia graminis	53.11	2.00e-57	217.00
IUUC-Ptt-103995	Puccinia triticina	51.98	1.00e-55	211.00
IUUC-Pte-104359	Pyrenophora teres	25.66	2.00e-45	176.00
IUUC-Pyt-104523	Pyrenophora triticirepentis	27.93	5.00e-63	234.00
IUUC-Sce-106186	Saccharomyces cerevisiae	32.50	2.00e-85	309.00
IUUC-Sja-107683	Schizosaccharomyces japonicus	33.00	2.00e-91	329.00
IUUC-Spo-108142	Schizosaccharomyces pombe	32.05	2.00e-89	322.00
IUUC-Ssl-108456	Sclerotinia sclerotiorum	38.80	7.00e-50	191.00
IUUC-Smo-109111	Selaginella moellendorffii	53.52	3.00e-176	610.00
IUUC-Sit-109804	Setaria italica	75.70	0.00e+00	883.00
IUUC-Sly-111693	Solanum lycopersicum	49.42	9.00e-158	549.00
IUUC-Sbi-114849	Sorghum bicolor	75.99	0.00e+00	887.00
IUUC-Sre-114945	Sporisorium reilianum	45.89	5.00e-56	212.00
IUUC-Tsy-119622	Tarsius syrichta	40.94	3.00e-34	139.00
IUUC-Tca-121247	Theobroma cacao	51.57	1.00e-161	562.00
IUUC-Tre-121949	Trichoderma reesei	29.84	4.00e-45	175.00
IUUC-Tvi-122626	Trichoderma virens	29.21	3.00e-44	172.00
IUUC-Tae-125816	Triticum aestivum	85.76	0.00e+00	897.00
IUUC-Tur-126316	Triticum urartu	99.64	0.00e+00	1018.00
IUUC-Tme-126904	Tuber melanosporum	43.23	3.00e-69	256.00
IUUC-Uma-129379	Ustilago maydis	47.74	4.00e-55	209.00
IUUC-Vda-129761	Verticillium dahliae	44.32	4.00e-42	165.00
IUUC-Vvi-131171	Vitis vinifera	52.40	4.00e-164	570.00
IUUC-Yli-134446	Yarrowia lipolytica	36.10	2.00e-106	379.00
IUUC-Zma-135722	Zea mays	75.37	0.00e+00	889.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence