iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cpo-021454

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAKN02016506

Gene Name

TAF5

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCPOG00000005294.3	ENSCPOT00000005351.2	ENSCPOP00000004762.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.20e-44	146.3	550	588
UBD/Beta-Prp	3.00e-87	292.5	398	719

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH ++v+c +f ++ +++++Gs D t+++WD+  g++++
   Q: 550  GHLADVNCTRFhPNsNYVATGSADRTVRLWDVLNGNCVR 588
           89**********777*****************9999986 PP

UBD/Beta-Prp

   S: 13   itcvkfspdksllatgsrdgtikvwdvttgkl...............................lrslsgheaevtavkfspdgkilvtg 70
           +t+v++++d+sl+a g++d+t++vw+vt++kl                               l+ l+gh+++v+  +fspd+++l+++
   Q: 398  LTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLrsvkqaadlslidkesddvlerimdektaseLKILYGHSGPVYGASFSPDRNYLLSS 486
           799************************************************************************************** PP
   S: 71   seDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDr 159
           seD+ +++w+l+t++c++ +kgh++ v++++fsp+g+++vsG+hdr++r+w ++++q l+ +++gh + vnc+++hp++n++++Gs+Dr
   Q: 487  SEDGSVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLR-IFAGHLADVNCTRFHPNSNYVATGSADR 574
           ************************************************************.**************************** PP
   S: 160  tvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiri 248
           tvrlWd+ +g+++r +tg h+++++sl+f++ng++l++g++dg+v lwd+ +g +v +l+ghtd+v+s+rfs+++e+l+sgs+D+++r+
   Q: 575  TVRLWDVLNGNCVRIFTG-HKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRL 662
           *****************9.********************************************************************** PP
   S: 249  W.......dlrsgdllktlqlhn..............ssvisvavlsfgdnvlvlgs 284
           W       dl+++d+++++ + n              +++++v +l+f++++lvl++
   Q: 663  WdaikafeDLETDDFTTATGHINlpensqelllgtymTKSTPVVHLHFTRRNLVLAA 719
           ****************************************************99986 PP

Organism

Cavia porcellus

Protein Sequence
(Fasta)

MAALAEEQTE VAVKLEPEAP PTLLPPQGTP NPQEAGALHD RQTLLAVLQF LRQSNLREAE 60
EALREARLLE ESAAGSGASG EPDGAEQQRA AQPFQRKAEQ SCRAEGWRGQ GHGEAGSSGF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGGCGC TGGCGGAGGA GCAGACGGAG GTGGCGGTCA AGCTGGAACC CGAGGCACCG 60
CCAACGTTGC TACCTCCACA AGCAGGCGAT GGTGCGGGCG AGGGAGGCGG CGGCACTCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR007582--TFIID_NTD2
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04494--TFIID_NTD2
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0015629--C:actin cytoskeleton
GO:0000790--C:nuclear chromatin
GO:0005669--C:transcription factor TFIID complex
GO:0033276--C:transcription factor TFTC complex
GO:0004402--F:histone acetyltransferase activity
GO:0003700--F:transcription factor activity, sequence-specific DNA binding
GO:0044212--F:transcription regulatory region DNA binding
GO:0006367--P:transcription initiation from RNA polymerase II promoter

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000261	Aegilops tauschii	33.22	2.00e-81	297.00
IUUC-Aml-001607	Ailuropoda melanoleuca	87.01	0.00e+00	1233.00
IUUC-Atr-003136	Amborella trichopoda	44.85	1.00e-95	343.00
IUUC-Apl-004193	Anas platyrhynchos	87.64	0.00e+00	1121.00
IUUC-Aca-004522	Anolis carolinensis	80.56	0.00e+00	1173.00
IUUC-Aly-006476	Arabidopsis lyrata	38.01	1.00e-114	407.00
IUUC-Ath-006587	Arabidopsis thaliana	37.54	2.00e-112	399.00
IUUC-Ago-007736	Ashbya gossypii	42.68	6.00e-93	335.00
IUUC-Acl-008092	Aspergillus clavatus	31.62	1.00e-89	323.00
IUUC-Afl-008659	Aspergillus flavus	31.16	2.00e-90	327.00
IUUC-Afu-008902	Aspergillus fumigatus	32.53	3.00e-91	329.00
IUUC-Ani-009462	Aspergillus nidulans	32.49	3.00e-82	299.00
IUUC-Aor-010083	Aspergillus oryzae	31.16	2.00e-90	327.00
IUUC-Ate-010271	Aspergillus terreus	32.07	4.00e-90	325.00
IUUC-Ame-010721	Astyanax mexicanus	74.86	0.00e+00	1091.00
IUUC-Bgr-012257	Blumeria graminis	28.90	2.00e-74	273.00
IUUC-Bta-013539	Bos taurus	87.46	0.00e+00	1235.00
IUUC-Bci-013737	Botrytis cinerea	28.83	3.00e-79	289.00
IUUC-Bdi-015041	Brachypodium distachyon	37.56	2.00e-100	359.00
IUUC-Bol-015483	Brassica oleracea	37.79	3.00e-113	402.00
IUUC-Bra-017147	Brassica rapa	37.11	3.00e-113	402.00
IUUC-Cel-018451	Caenorhabditis elegans	33.79	4.00e-88	318.00
IUUC-Cja-018881	Callithrix jacchus	88.03	0.00e+00	1229.00
IUUC-Cfa-020056	Canis familiaris	87.89	0.00e+00	1241.00
IUUC-Cre-022736	Chlamydomonas reinhardtii	37.54	1.00e-51	197.00
IUUC-Csa-023045	Chlorocebus sabaeus	94.23	0.00e+00	1151.00
IUUC-Cho-024284	Choloepus hoffmanni	93.67	1.00e-166	580.00
IUUC-Cin-025457	Ciona intestinalis	60.66	3.00e-100	357.00
IUUC-Csv-025882	Ciona savignyi	50.08	3.00e-178	618.00
IUUC-Cgl-026392	Colletotrichum gloeosporioides	28.26	9.00e-77	281.00
IUUC-Cne-026876	Cryptococcus neoformans	39.94	2.00e-73	270.00
IUUC-Cme-027302	Cyanidioschyzon merolae	33.95	2.00e-100	360.00
IUUC-Dre-027980	Danio rerio	73.62	0.00e+00	1057.00
IUUC-Dno-028863	Dasypus novemcinctus	94.15	0.00e+00	1204.00
IUUC-Dor-030561	Dipodomys ordii	88.31	0.00e+00	1213.00
IUUC-Dse-031547	Dothistroma septosporum	30.97	1.00e-80	294.00
IUUC-Dme-031917	Drosophila melanogaster	44.87	7.00e-144	504.00
IUUC-Ete-032319	Echinops telfairi	74.92	0.00e+00	906.00
IUUC-Eca-033927	Equus caballus	88.66	0.00e+00	1244.00
IUUC-Eeu-034449	Erinaceus europaeus	92.73	0.00e+00	950.00
IUUC-Fca-036325	Felis catus	87.75	0.00e+00	1224.00
IUUC-Fal-036604	Ficedula albicollis	89.85	0.00e+00	1150.00
IUUC-Fox-038049	Fusarium oxysporum	33.06	2.00e-49	191.00
IUUC-Fso-038302	Fusarium solani	28.96	2.00e-66	247.00
IUUC-Gmo-038832	Gadus morhua	70.86	0.00e+00	1000.00
IUUC-Ggr-039878	Gaeumannomyces graminis	28.74	3.00e-70	259.00
IUUC-Gga-041147	Gallus gallus	91.13	0.00e+00	1169.00
IUUC-Gac-041373	Gasterosteus aculeatus	74.58	0.00e+00	1049.00
IUUC-Gma-043230	Glycine max	37.15	6.00e-119	421.00
IUUC-Ggo-045526	Gorilla gorilla	83.82	0.00e+00	808.00
IUUC-Hsa-045971	Homo sapiens	87.18	0.00e+00	1212.00
IUUC-Hvu-047695	Hordeum vulgare	49.12	2.00e-86	312.00
IUUC-Itr-048400	Ictidomys tridecemlineatus	87.61	0.00e+00	1229.00
IUUC-Kpa-049402	Komagataella pastoris	36.22	4.00e-111	395.00
IUUC-Lch-049526	Latimeria chalumnae	82.60	0.00e+00	1048.00
IUUC-Lpe-051560	Leersia perrieri	47.13	5.00e-89	322.00
IUUC-Loc-052882	Lepisosteus oculatus	77.01	0.00e+00	1122.00
IUUC-Lma-053212	Leptosphaeria maculans	29.62	2.00e-80	293.00
IUUC-Laf-053859	Loxodonta africana	88.03	0.00e+00	1238.00
IUUC-Mcc-054957	Macaca mulatta	93.35	0.00e+00	984.00
IUUC-Meu-056766	Macropus eugenii	91.46	0.00e+00	663.00
IUUC-Mor-057024	Magnaporthe oryzae	28.84	6.00e-70	258.00
IUUC-Mpo-057520	Magnaporthe poae	28.77	8.00e-70	258.00
IUUC-Mtr-058754	Medicago truncatula	37.50	4.00e-122	432.00
IUUC-Mla-058881	Melampsora laricipopulina	36.77	5.00e-80	292.00
IUUC-Mga-059776	Meleagris gallopavo	90.88	0.00e+00	1172.00
IUUC-Mvi-060208	Microbotryum violaceum	41.49	7.00e-83	301.00
IUUC-Mmr-061783	Microcebus murinus	93.35	0.00e+00	984.00
IUUC-Mdo-062856	Monodelphis domestica	93.33	0.00e+00	1194.00
IUUC-Mmu-064218	Mus musculus	89.15	0.00e+00	1231.00
IUUC-Mac-064886	Musa acuminata	52.67	4.00e-72	266.00
IUUC-Mpu-065735	Mustela putorius furo	87.45	0.00e+00	1234.00
IUUC-Mlu-067544	Myotis lucifugus	94.32	0.00e+00	1201.00
IUUC-Nfi-068502	Neosartorya fischeri	32.53	2.00e-91	330.00
IUUC-Ncr-068891	Neurospora crassa	29.83	3.00e-75	276.00
IUUC-Nle-069389	Nomascus leucogenys	88.03	0.00e+00	1228.00
IUUC-Opr-071042	Ochotona princeps	87.40	0.00e+00	674.00
IUUC-Ont-071455	Oreochromis niloticus	75.03	0.00e+00	1074.00
IUUC-Oan-073181	Ornithorhynchus anatinus	90.89	0.00e+00	1162.00
IUUC-Ocu-073758	Oryctolagus cuniculus	88.45	0.00e+00	1231.00
IUUC-Oba-075739	Oryza barthii	46.24	8.00e-81	294.00
IUUC-Obr-076111	Oryza brachyantha	46.91	3.00e-95	342.00
IUUC-Ogl-077914	Oryza glaberrima	36.74	5.00e-99	355.00
IUUC-Ogu-078190	Oryza glumaepatula	35.40	6.00e-91	328.00
IUUC-Oin-079473	Oryza indica	37.46	7.00e-102	364.00
IUUC-Olo-080557	Oryza longistaminata	52.36	4.00e-70	258.00
IUUC-Ome-081831	Oryza meridionalis	43.35	6.00e-71	261.00
IUUC-Oni-082431	Oryza nivara	36.64	2.00e-99	356.00
IUUC-Opu-083325	Oryza punctata	36.66	2.00e-92	333.00
IUUC-Oru-085131	Oryza rufipogon	44.41	3.00e-72	266.00
IUUC-Osa-086189	Oryza sativa	37.62	7.00e-103	368.00
IUUC-Ola-086574	Oryzias latipes	73.19	0.00e+00	1092.00
IUUC-Olu-087616	Ostreococcus lucimarinus	40.53	3.00e-83	302.00
IUUC-Oga-088827	Otolemur garnettii	81.65	0.00e+00	1244.00
IUUC-Oar-089648	Ovis aries	87.61	0.00e+00	1236.00
IUUC-Ptr-091195	Pan troglodytes	87.18	0.00e+00	1226.00
IUUC-Pan-091978	Papio anubis	87.75	0.00e+00	1226.00
IUUC-Psi-093598	Pelodiscus sinensis	90.81	0.00e+00	1056.00
IUUC-Pno-094823	Phaeosphaeria nodorum	30.37	1.00e-82	301.00
IUUC-Ppa-095455	Physcomitrella patens	37.38	3.00e-114	405.00
IUUC-Pfo-097120	Poecilia formosa	75.25	0.00e+00	1060.00
IUUC-Pab-098771	Pongo abelii	87.89	0.00e+00	1226.00
IUUC-Pop-099542	Populus trichocarpa	37.40	7.00e-119	421.00
IUUC-Pca-100804	Procavia capensis	84.66	0.00e+00	918.00
IUUC-Ppe-101686	Prunus persica	37.58	1.00e-110	394.00
IUUC-Pva-102414	Pteropus vampyrus	83.24	0.00e+00	1145.00
IUUC-Pgr-103603	Puccinia graminis	36.62	1.00e-72	268.00
IUUC-Pte-104359	Pyrenophora teres	29.81	2.00e-82	300.00
IUUC-Pyt-104523	Pyrenophora triticirepentis	29.66	7.00e-84	305.00
IUUC-Rno-105064	Rattus norvegicus	89.15	0.00e+00	1229.00
IUUC-Sce-106186	Saccharomyces cerevisiae	42.51	3.00e-90	326.00
IUUC-Sha-106582	Sarcophilus harrisii	93.50	0.00e+00	1198.00
IUUC-Sja-107683	Schizosaccharomyces japonicus	37.08	7.00e-109	387.00
IUUC-Spo-108142	Schizosaccharomyces pombe	36.41	4.00e-108	385.00
IUUC-Ssl-108456	Sclerotinia sclerotiorum	28.14	2.00e-78	286.00
IUUC-Smo-109111	Selaginella moellendorffii	35.91	2.00e-107	383.00
IUUC-Sit-109804	Setaria italica	37.99	3.00e-105	375.00
IUUC-Sly-111693	Solanum lycopersicum	36.73	4.00e-110	392.00
IUUC-Sar-113412	Sorex araneus	92.71	0.00e+00	794.00
IUUC-Sbi-114849	Sorghum bicolor	37.58	3.00e-104	372.00
IUUC-Sre-114945	Sporisorium reilianum	38.67	1.00e-76	281.00
IUUC-Ssc-115582	Sus scrofa	85.93	0.00e+00	1005.00
IUUC-Tgu-116899	Taeniopygia guttata	82.71	0.00e+00	1159.00
IUUC-Tru-118011	Takifugu rubripes	74.79	0.00e+00	1072.00
IUUC-Tni-120598	Tetraodon nigroviridis	75.14	0.00e+00	1066.00
IUUC-Tca-121247	Theobroma cacao	35.66	3.00e-117	415.00
IUUC-Tre-121949	Trichoderma reesei	36.41	9.00e-63	234.00
IUUC-Tvi-122626	Trichoderma virens	28.26	5.00e-74	272.00
IUUC-Tae-123335	Triticum aestivum	49.71	4.00e-88	319.00
IUUC-Tur-126005	Triticum urartu	35.05	8.00e-87	314.00
IUUC-Tme-126904	Tuber melanosporum	35.62	8.00e-106	377.00
IUUC-Tbe-127254	Tupaia belangeri	83.75	0.00e+00	1151.00
IUUC-Ttr-128544	Tursiops truncatus	93.87	0.00e+00	1208.00
IUUC-Uma-129379	Ustilago maydis	37.50	1.00e-76	281.00
IUUC-Vda-129761	Verticillium dahliae	27.00	6.00e-66	245.00
IUUC-Vpa-130485	Vicugna pacos	93.87	0.00e+00	1209.00
IUUC-Vvi-131171	Vitis vinifera	37.36	2.00e-116	413.00
IUUC-Xtr-132762	Xenopus tropicalis	69.48	0.00e+00	952.00
IUUC-Xma-133583	Xiphophorus maculatus	75.25	0.00e+00	1058.00
IUUC-Yli-134446	Yarrowia lipolytica	37.68	5.00e-118	418.00
IUUC-Zma-135722	Zea mays	36.29	2.00e-101	363.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence