iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-043817

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000837

Gene Name

LOC100805953; GLYMA_04G061600

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA04G06540	GLYMA04G06540.1	GLYMA04G06540.1
GLYMA04G06540	GLYMA04G06540.2	GLYMA04G06540.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.90e-41	138.8	500	538
UBD/Beta-Prp	3.50e-67	228.3	344	657

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllk 37
           gH ++v c+++  +++++++Gs D+t+++WD+ +g +++
   Q: 500  GHLSDVDCVQWhaNCNYIATGSSDKTVRLWDVQSGECVR 538
           8***********766*********************986 PP

UBD/Beta-Prp

   S: 3    ktlkghhksvitcvkfspdksllatgsrdgtikvwdvttgkl..........................lrsl.sgheaevtavkfspdgkilvt 69
           +++++h+    +c  +s d+sl+a g+ d+++kvwd+ +                               +l +gh+++v+a +fsp g+++++
   Q: 344  TFINTHNGL--SCSSISHDGSLIAGGFSDSSLKVWDMAKLGQqasslsqgendtsqneqifgqgggkrQYTLfQGHSGPVYAASFSPVGDFILS 435
           566667774..4556667*******************994448899999999999999999999999955666999999*************** PP
   S: 70   gseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrl 163
           +s D ti++w+ + +  ++ +kgh++ v++++fsp g++++s shdrt+r+w ++  q l+ + +gh + v cv++h ++n++++Gs D+tvrl
   Q: 436  SSADSTIRLWSTKLNANLVCYKGHNYPVWDVQFSPVGHYFASSSHDRTARIWSMDRIQPLR-IMAGHLSDVDCVQWHANCNYIATGSSDKTVRL 528
           *************************************************************.******************************** PP
   S: 164  WdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdll 257
           Wd+++g+++r + g h  ++ sl+++++g++++sg++dgt+ +wdl++g+c+  l+ght+ v+s++fs+++ +++sgs+D ++++Wd+  ++ +
   Q: 529  WDVQSGECVRVFVG-HRVMILSLAMSPDGRYMASGDEDGTIMMWDLSSGRCLTPLIGHTSCVWSLAFSSEGSIIASGSADCTVKLWDVNASTKV 621
           *************9.************************************************************************9988888 PP
   S: 258  ktlqlhn..............ssvisvavlsfgdnv 279
           +  + +               +++++v  l+f++++
   Q: 622  SRAEEKSgsansrlrslktlsTKSTPVYSLRFSRRN 657
           777776677776666666666666666666666555 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MEDDKIVGYV TAFLKKKGFT QTEKIFQEEF QHNKSNTSNS LLEPDIANHL LAFSQLETGP 60
ARFHDGYSRL RTWTYSSLDL YKHELLRVLY PVFIHCFMDL VAKGHVQEAR NFFNTFREDH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTGAATACA ATTGCCGTTA TTTCTCTTTC AGAAAGGGTT ATCCATAAAA CAACAACTTA 60
ATAAAAAAAA AGAGAGAAAA CAGCCCTGCA CGTCGACCCA ACCTCACTGG AGTTGCGTAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR007582--TFIID_NTD2
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04494--TFIID_NTD2
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

gmx:100805953

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006476	Arabidopsis lyrata	73.17	0.00e+00	976.00
IUUC-Ago-007736	Ashbya gossypii	34.04	6.00e-108	385.00
IUUC-Ani-009462	Aspergillus nidulans	29.78	1.00e-73	270.00
IUUC-Ame-010721	Astyanax mexicanus	45.79	2.00e-95	343.00
IUUC-Cre-022736	Chlamydomonas reinhardtii	39.51	2.00e-62	233.00
IUUC-Cgl-026392	Colletotrichum gloeosporioides	28.19	1.00e-73	271.00
IUUC-Fox-038049	Fusarium oxysporum	26.89	2.00e-61	230.00
IUUC-Fso-038302	Fusarium solani	28.81	3.00e-72	266.00
IUUC-Gmo-038832	Gadus morhua	43.80	3.00e-92	333.00
IUUC-Gac-041373	Gasterosteus aculeatus	45.03	1.00e-92	334.00
IUUC-Lpe-051560	Leersia perrieri	66.72	0.00e+00	857.00
IUUC-Loc-052882	Lepisosteus oculatus	46.05	9.00e-94	338.00
IUUC-Mor-057024	Magnaporthe oryzae	29.07	5.00e-72	265.00
IUUC-Opr-071042	Ochotona princeps	42.74	2.00e-84	306.00
IUUC-Ont-071455	Oreochromis niloticus	45.81	2.00e-96	347.00
IUUC-Oba-075739	Oryza barthii	65.45	0.00e+00	787.00
IUUC-Ogl-077914	Oryza glaberrima	69.25	0.00e+00	871.00
IUUC-Ogu-078057	Oryza glumaepatula	62.56	0.00e+00	741.00
IUUC-Oin-079473	Oryza indica	70.52	0.00e+00	882.00
IUUC-Ome-081831	Oryza meridionalis	62.71	0.00e+00	740.00
IUUC-Oni-082441	Oryza nivara	63.32	0.00e+00	746.00
IUUC-Opu-083239	Oryza punctata	59.88	0.00e+00	744.00
IUUC-Oru-085131	Oryza rufipogon	63.47	0.00e+00	747.00
IUUC-Osa-086189	Oryza sativa	70.52	0.00e+00	880.00
IUUC-Ola-086574	Oryzias latipes	44.76	4.00e-94	338.00
IUUC-Pma-094593	Petromyzon marinus	39.62	1.00e-59	224.00
IUUC-Ppe-101686	Prunus persica	78.60	0.00e+00	1097.00
IUUC-Sja-107683	Schizosaccharomyces japonicus	35.35	4.00e-114	405.00
IUUC-Sly-111693	Solanum lycopersicum	73.20	0.00e+00	992.00
IUUC-Ssc-115582	Sus scrofa	45.97	2.00e-96	346.00
IUUC-Tni-120598	Tetraodon nigroviridis	44.09	7.00e-93	335.00
IUUC-Tae-123335	Triticum aestivum	68.61	0.00e+00	838.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence