iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-015083

Ensembl Protein ID

Bo4g154800.1

UniProt Accession

A0A0D3C1U2; A0A0D3C1U2_BRAOL

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo4g154800	Bo4g154800.1	Bo4g154800.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	1.10e-71	243.3	178	484

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrellle.kkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeqqDaqEfl 96
           +Gl+N gN+C+ N vLQcLs +++l  +lle  +k++++++     + ++l+++++ +e   + ++  +sp ++++ l ++  ++   +q+Da+E++
   Q: 178  CGLTNCGNSCFANVVLQCLSWTRPLVAYLLErGHKRECRRN-----DWCFLCEFETHLERA-NISRFPFSPMNIISRLPNIGGNLGYGRQEDAHELM 268
           7******************************7778888776.....56**********999.99999****************************** PP
   S: 97   aflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkkeslqdcLes 193
           +f++d +++ +         ee++ +       +   +  ++++li+ +F+g l+sq++c  c nvs ++e+++dl+++++g+      sl++cL++
   Q: 269  RFVIDMMQSVC--------LEEFGGE-------KVVPPRAQETTLIQYIFGGLLQSQVQCTVCSNVSDQYENMMDLTVEIHGDAV----SLEECLDQ 346
           ***********........4444444.......68899999*******************************************7....8******* PP
   S: 194  ftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfctspeekqkekkkYeLiavvvHsGsl 290
           ft++e l+g+n y+c++c+++++a k+l++++ P++L++ LkRf    ++++  k+nk+++fp++Ldl p+++    +   ++ Y+L+av+vH   l
   Q: 347  FTAKEWLQGDNLYKCDRCNDYVKACKRLSIRSAPNILTVALKRF----QGGRFGKLNKRISFPETLDLGPYMSCGGGEG--SDVYKLYAVIVHLDML 437
           ********************************************....567889****************999855555..9***********9955 PP
   S: 291  ss...GHYvayvknekgkWllfdDskVtevkeeevleetgstaYvlfYkr 337
           +    GHY++yvk+ +g+W+++dDs+V++v+ e+vl+   + aY+l+Y r
   Q: 438  NAsffGHYICYVKDFRGDWYRIDDSEVEKVELEDVLS---QRAYMLLYSR 484
           54455********************************...9*******87 PP

Organism

Brassica oleracea

Protein Sequence
(Fasta)

MHEVGLTWDL NSFTQLVLTL FLLSFGLLFF VKRTAAKYFE VDGGGGSGGF DSDLRRDFMV 60
PDASECSVCG NLTTKKCSRC KSVRYCSAEC QRSDWNAGHK LKCKVVKTTT GSSPGRRDDL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCACGAAG TTGGATTGAC GTGGGATCTC AATTCCTTCA CGCAGCTCGT CCTCACTCTC 60
TTCCTCCTCT CCTTCGGCCT CCTCTTCTTT GTCAAACGAA CGGCGGCCAA GTACTTCGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom
IPR002893--Znf_MYND

PROSITE

PS00972--USP_1
PS50235--USP_3
PS01360--ZF_MYND_1
PS50865--ZF_MYND_2

Pfam

PF00443--UCH
PF01753--zf-MYND

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0046872--F:metal ion binding
GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001055	Aegilops tauschii	64.89	2.00e-140	493.00
IUUC-Aly-005942	Arabidopsis lyrata	79.39	0.00e+00	954.00
IUUC-Ath-007334	Arabidopsis thaliana	80.16	0.00e+00	998.00
IUUC-Bdi-014660	Brachypodium distachyon	57.05	2.00e-149	523.00
IUUC-Bra-017569	Brassica rapa	92.71	0.00e+00	1156.00
IUUC-Gma-042958	Glycine max	62.26	0.00e+00	635.00
IUUC-Hvu-047620	Hordeum vulgare	58.94	4.00e-155	541.00
IUUC-Lpe-051385	Leersia perrieri	55.87	4.00e-130	458.00
IUUC-Oba-075131	Oryza barthii	62.65	2.00e-147	516.00
IUUC-Obr-076763	Oryza brachyantha	62.61	4.00e-159	555.00
IUUC-Ogl-077264	Oryza glaberrima	62.39	8.00e-159	554.00
IUUC-Ogu-078646	Oryza glumaepatula	62.39	9.00e-159	554.00
IUUC-Oin-079613	Oryza indica	59.35	2.00e-148	519.00
IUUC-Olo-080250	Oryza longistaminata	62.39	6.00e-159	554.00
IUUC-Ome-081416	Oryza meridionalis	62.39	7.00e-159	554.00
IUUC-Oni-082102	Oryza nivara	62.16	1.00e-157	550.00
IUUC-Opu-083135	Oryza punctata	61.93	8.00e-158	551.00
IUUC-Oru-084644	Oryza rufipogon	62.39	2.00e-158	553.00
IUUC-Osa-086195	Oryza sativa	62.17	4.00e-149	521.00
IUUC-Smo-109625	Selaginella moellendorffii	55.16	3.00e-145	509.00
IUUC-Sit-109798	Setaria italica	62.81	2.00e-161	562.00
IUUC-Sly-111333	Solanum lycopersicum	61.83	0.00e+00	654.00
IUUC-Stu-112696	Solanum tuberosum	62.15	2.00e-122	431.00
IUUC-Sbi-113982	Sorghum bicolor	61.19	6.00e-160	558.00
IUUC-Tca-121521	Theobroma cacao	62.04	0.00e+00	666.00
IUUC-Tae-125546	Triticum aestivum	59.87	2.00e-155	543.00
IUUC-Tur-126423	Triticum urartu	64.89	2.00e-140	493.00
IUUC-Vvi-130927	Vitis vinifera	68.89	0.00e+00	639.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence