iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Kpa-049335

Ensembl Protein ID

CAY69200

UniProt Accession

C4R126; C4R126_KOMPG

Genbank Protein ID

CAY69200.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

FN392320

Gene Name

PAS_chr2-1_0863

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PAS_chr2-1_0863	CAY69200	CAY69200

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.40e-10	38.4	223	252

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           H++ +  +af ++ +ll++G+ D ti+++ l
   Q: 223  HSS-IKTIAFhPThPLLATGGMDRTIRIFQL 252
           555.99*****888**************975 PP

Organism

Komagataella pastoris

Protein Sequence
(Fasta)

MIVDEQAMEI PPKDEEELEL ERLVFGDLEG FEKGLRDVDF FGRDETEADS GNEPEGDDVS 60
EDDDFEKLQD DQLFFVDESK GDVGVDYHGE SGSEDNTDYS EEESDAWEDS DDQNLRISVV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATCGTAG ACGAACAAGC TATGGAAATA CCCCCCAAGG ATGAGGAGGA GTTGGAATTG 60
GAACGTCTTG TATTTGGTGA TCTTGAAGGA TTTGAAAAAG GGCTGAGAGA TGTGGATTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0000480--P:endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000447--P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000472--P:endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

KEGG

ppa:PAS_chr2-1_0863

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000184	Aegilops tauschii	33.04	1.00e-63	235.00
IUUC-Aml-002252	Ailuropoda melanoleuca	29.50	1.00e-48	185.00
IUUC-Atr-002575	Amborella trichopoda	31.00	1.00e-59	221.00
IUUC-Aly-006512	Arabidopsis lyrata	31.07	7.00e-60	222.00
IUUC-Ath-007244	Arabidopsis thaliana	32.62	8.00e-60	222.00
IUUC-Ago-007895	Ashbya gossypii	41.09	1.00e-105	374.00
IUUC-Acl-008343	Aspergillus clavatus	33.93	4.00e-75	273.00
IUUC-Afl-008445	Aspergillus flavus	34.32	2.00e-84	304.00
IUUC-Aor-009986	Aspergillus oryzae	34.32	3.00e-83	300.00
IUUC-Ame-011338	Astyanax mexicanus	31.82	1.00e-42	165.00
IUUC-Bgr-012201	Blumeria graminis	31.41	4.00e-71	260.00
IUUC-Bta-013058	Bos taurus	31.23	9.00e-47	179.00
IUUC-Bci-013619	Botrytis cinerea	33.75	4.00e-75	273.00
IUUC-Bdi-014771	Brachypodium distachyon	31.12	2.00e-60	224.00
IUUC-Bol-015230	Brassica oleracea	33.74	7.00e-55	206.00
IUUC-Bra-017041	Brassica rapa	33.50	2.00e-54	204.00
IUUC-Cel-018293	Caenorhabditis elegans	26.59	3.00e-41	160.00
IUUC-Cja-019503	Callithrix jacchus	29.66	1.00e-48	185.00
IUUC-Cfa-020743	Canis familiaris	31.44	1.00e-47	182.00
IUUC-Cpo-021488	Cavia porcellus	31.23	2.00e-46	177.00
IUUC-Cre-022926	Chlamydomonas reinhardtii	27.10	1.00e-48	184.00
IUUC-Csa-023110	Chlorocebus sabaeus	29.05	4.00e-49	187.00
IUUC-Cin-025208	Ciona intestinalis	27.58	9.00e-36	142.00
IUUC-Cme-027351	Cyanidioschyzon merolae	26.55	3.00e-39	154.00
IUUC-Dre-027524	Danio rerio	26.81	4.00e-31	126.00
IUUC-Dno-029243	Dasypus novemcinctus	32.63	6.00e-49	186.00
IUUC-Dor-030110	Dipodomys ordii	31.75	2.00e-46	178.00
IUUC-Dse-031217	Dothistroma septosporum	34.04	6.00e-73	266.00
IUUC-Dme-031999	Drosophila melanogaster	27.91	2.00e-38	151.00
IUUC-Eca-034350	Equus caballus	29.02	7.00e-49	186.00
IUUC-Eeu-034991	Erinaceus europaeus	31.11	2.00e-46	177.00
IUUC-Fal-036614	Ficedula albicollis	30.33	4.00e-43	167.00
IUUC-Gmo-039183	Gadus morhua	31.31	1.00e-43	168.00
IUUC-Gga-040922	Gallus gallus	28.97	5.00e-48	182.00
IUUC-Gac-041475	Gasterosteus aculeatus	27.68	6.00e-41	159.00
IUUC-Gma-043598	Glycine max	32.99	2.00e-68	251.00
IUUC-Ggo-044517	Gorilla gorilla	27.93	3.00e-49	187.00
IUUC-Hsa-045741	Homo sapiens	27.93	4.00e-49	187.00
IUUC-Hvu-047463	Hordeum vulgare	32.70	3.00e-22	95.90
IUUC-Itr-048128	Ictidomys tridecemlineatus	31.72	1.00e-48	185.00
IUUC-Lch-049816	Latimeria chalumnae	31.14	3.00e-40	157.00
IUUC-Lpe-051140	Leersia perrieri	32.97	5.00e-61	226.00
IUUC-Loc-051942	Lepisosteus oculatus	28.21	2.00e-43	167.00
IUUC-Laf-054245	Loxodonta africana	28.34	5.00e-50	189.00
IUUC-Meu-056300	Macropus eugenii	27.93	5.00e-37	146.00
IUUC-Mor-057184	Magnaporthe oryzae	28.75	2.00e-57	214.00
IUUC-Mtr-058019	Medicago truncatula	31.72	7.00e-58	216.00
IUUC-Mga-060179	Meleagris gallopavo	29.12	7.00e-46	175.00
IUUC-Mvi-060435	Microbotryum violaceum	31.14	1.00e-54	205.00
IUUC-Mdo-062187	Monodelphis domestica	31.34	5.00e-46	176.00
IUUC-Mmu-063386	Mus musculus	29.71	5.00e-52	196.00
IUUC-Mpu-066084	Mustela putorius furo	30.79	5.00e-48	183.00
IUUC-Mlu-068130	Myotis lucifugus	30.93	9.00e-48	182.00
IUUC-Nle-069743	Nomascus leucogenys	26.87	9.00e-42	162.00
IUUC-Opr-071111	Ochotona princeps	31.63	4.00e-49	186.00
IUUC-Ont-071979	Oreochromis niloticus	29.47	1.00e-46	178.00
IUUC-Ocu-073754	Oryctolagus cuniculus	30.20	1.00e-48	185.00
IUUC-Oba-075007	Oryza barthii	33.72	3.00e-61	227.00
IUUC-Obr-076447	Oryza brachyantha	33.55	7.00e-64	236.00
IUUC-Ogl-077733	Oryza glaberrima	33.72	2.00e-61	228.00
IUUC-Ogu-078828	Oryza glumaepatula	33.72	3.00e-61	227.00
IUUC-Oin-080152	Oryza indica	33.49	5.00e-61	226.00
IUUC-Olo-080983	Oryza longistaminata	32.28	3.00e-60	223.00
IUUC-Oni-082443	Oryza nivara	33.49	6.00e-61	226.00
IUUC-Opu-083771	Oryza punctata	31.86	3.00e-58	217.00
IUUC-Oru-084272	Oryza rufipogon	33.49	8.00e-61	226.00
IUUC-Osa-085885	Oryza sativa	33.26	1.00e-62	231.00
IUUC-Olu-087644	Ostreococcus lucimarinus	22.87	6.00e-16	76.30
IUUC-Oga-088834	Otolemur garnettii	28.69	5.00e-50	190.00
IUUC-Oar-089712	Ovis aries	30.93	5.00e-46	176.00
IUUC-Pan-092561	Papio anubis	28.13	7.00e-49	186.00
IUUC-Ppa-095397	Physcomitrella patens	30.02	2.00e-54	204.00
IUUC-Pfo-097068	Poecilia formosa	31.38	1.00e-48	185.00
IUUC-Pop-099471	Populus trichocarpa	32.21	7.00e-56	209.00
IUUC-Ppe-101446	Prunus persica	32.17	3.00e-60	223.00
IUUC-Pva-102851	Pteropus vampyrus	29.11	3.00e-45	174.00
IUUC-Pgr-103370	Puccinia graminis	29.30	4.00e-53	200.00
IUUC-Ptt-103838	Puccinia triticina	26.85	2.00e-44	171.00
IUUC-Rno-104910	Rattus norvegicus	29.95	7.00e-49	186.00
IUUC-Sce-106258	Saccharomyces cerevisiae	40.40	5.00e-107	379.00
IUUC-Sja-107746	Schizosaccharomyces japonicus	37.06	7.00e-97	345.00
IUUC-Spo-108268	Schizosaccharomyces pombe	39.56	1.00e-97	348.00
IUUC-Smo-108815	Selaginella moellendorffii	29.56	1.00e-54	205.00
IUUC-Sit-109706	Setaria italica	32.68	6.00e-61	226.00
IUUC-Sly-111533	Solanum lycopersicum	30.19	3.00e-58	217.00
IUUC-Stu-112853	Solanum tuberosum	30.00	6.00e-57	213.00
IUUC-Sbi-114747	Sorghum bicolor	34.12	2.00e-64	238.00
IUUC-Ssc-115916	Sus scrofa	29.54	6.00e-50	189.00
IUUC-Tgu-117291	Taeniopygia guttata	30.40	6.00e-42	162.00
IUUC-Tru-118724	Takifugu rubripes	31.00	2.00e-43	167.00
IUUC-Tsy-118928	Tarsius syrichta	35.07	4.00e-34	137.00
IUUC-Tca-121229	Theobroma cacao	32.19	2.00e-63	234.00
IUUC-Tae-125218	Triticum aestivum	33.77	4.00e-63	233.00
IUUC-Tur-126082	Triticum urartu	30.00	3.00e-35	140.00
IUUC-Ttr-128904	Tursiops truncatus	32.51	2.00e-39	154.00
IUUC-Vpa-130817	Vicugna pacos	29.29	6.00e-51	192.00
IUUC-Vvi-131395	Vitis vinifera	31.41	4.00e-62	230.00
IUUC-Xtr-132971	Xenopus tropicalis	28.27	1.00e-48	185.00
IUUC-Xma-133391	Xiphophorus maculatus	31.15	3.00e-48	183.00
IUUC-Yli-134613	Yarrowia lipolytica	37.50	4.00e-98	349.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence