iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ppa-096026

Ensembl Protein ID

PP1S235_47V6.1

UniProt Accession

A9TI08; A9TI08_PHYPA

Genbank Protein ID

EDQ56900.1

Protein Name

Predicted protein

Genbank Nucleotide ID

DS545124

Gene Name

PHYPADRAFT_93018

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S235_47V6	PP1S235_47V6.1	PP1S235_47V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	9.30e-13	48.9	16	72

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClkls........veeelpnsekwiCpkCrs 53
           +C +C++++++e+ ++ C++Crew+H++Cl+l+           el+n e + Cp+C++
   Q: 16   YC-ICRKPYDEEEAMIACDQCREWYHYGCLGLAeperseggSLGELENAE-YVCPDCEQ 72
           8*.******************************88888877777777776.******87 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MGFWLQQGLR RRSVVYCICR KPYDEEEAMI ACDQCREWYH YGCLGLAEPE RSEGGSLGEL 60
ENAEYVCPDC EQSQHVGVAE AHGMEIPCMT SKTLEFYDKE TEDNGCGSEA PPAPVTPETP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGGTTTT GGTTGCAACA GGGTTTGAGG AGGAGGAGTG TAGTGTACTG CATATGTCGG 60
AAGCCTTACG ACGAGGAGGA AGCCATGATA GCGTGCGACC AGTGCAGGGA GTGGTACCAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001606--ARID_dom
IPR003347--JmjC_dom
IPR003349--JmjN
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51011--ARID
PS51184--JMJC
PS51183--JMJN
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF01388--ARID
PF02373--JmjC
PF02375--JmjN
PF00628--PHD

SMART

SM00501--BRIGHT
SM00558--JmjC
SM00545--JmjN
SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0003677--F:DNA binding
GO:0008270--F:zinc ion binding

KEGG

ppp:PHYPADRAFT_93018

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002595	Amborella trichopoda	53.23	2.00e-13	72.00
IUUC-Bdi-014050	Brachypodium distachyon	68.29	3.00e-12	67.80
IUUC-Cin-025225	Ciona intestinalis	44.07	1.00e-10	60.80
IUUC-Cgl-026411	Colletotrichum gloeosporioides	41.82	9.00e-08	50.40
IUUC-Hvu-047160	Hordeum vulgare	68.29	2.00e-12	68.20
IUUC-Kpa-049165	Komagataella pastoris	59.38	2.00e-08	52.40
IUUC-Lpe-051537	Leersia perrieri	69.77	2.00e-12	68.60
IUUC-Mvi-060256	Microbotryum violaceum	38.98	5.00e-08	52.80
IUUC-Mac-064704	Musa acuminata	36.79	8.00e-14	70.50
IUUC-Oba-075388	Oryza barthii	70.73	4.00e-12	67.40
IUUC-Obr-076296	Oryza brachyantha	70.73	2.00e-12	69.30
IUUC-Ogl-076925	Oryza glaberrima	70.73	8.00e-13	66.60
IUUC-Ogu-079040	Oryza glumaepatula	70.73	4.00e-12	67.40
IUUC-Ome-081764	Oryza meridionalis	70.73	4.00e-12	67.40
IUUC-Oni-083012	Oryza nivara	70.73	4.00e-12	67.40
IUUC-Opu-083164	Oryza punctata	70.73	2.00e-12	68.20
IUUC-Oru-084630	Oryza rufipogon	70.73	4.00e-12	67.40
IUUC-Olu-087633	Ostreococcus lucimarinus	39.34	5.00e-10	58.90
IUUC-Ppe-101504	Prunus persica	53.12	1.00e-12	68.90
IUUC-Sce-106421	Saccharomyces cerevisiae	36.84	4.00e-06	45.10
IUUC-Stu-112199	Solanum tuberosum	48.39	1.00e-11	63.50
IUUC-Sre-115149	Sporisorium reilianum	42.86	7.00e-08	51.60
IUUC-Uma-129637	Ustilago maydis	37.29	1.00e-07	51.20
IUUC-Vvi-131071	Vitis vinifera	49.21	4.00e-13	70.50

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence