iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d007904	Zm00001d007904_T004	Zm00001d007904_T004
Zm00001d007904	Zm00001d007904_T030	Zm00001d007904_T030
Zm00001d007904	Zm00001d007904_T014	Zm00001d007904_T014
Zm00001d007904	Zm00001d007904_T001	Zm00001d007904_T001
Zm00001d007904	Zm00001d007904_T031	Zm00001d007904_T031
Zm00001d007904	Zm00001d007904_T002	Zm00001d007904_T002
Zm00001d007904	Zm00001d007904_T003	Zm00001d007904_T003
Zm00001d007904	Zm00001d007904_T039	Zm00001d007904_T039
Zm00001d007904	Zm00001d007904_T022	Zm00001d007904_T022
Zm00001d007904	Zm00001d007904_T021	Zm00001d007904_T021
Zm00001d007904	Zm00001d007904_T026	Zm00001d007904_T026

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	1.50e-61	210.5	322	509
ULD/UDP/UBQ/UBQ_Other	7.20e-06	27.8	584	619

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 171  dlslpvpgkeetkkeslqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLd 260
           +l+l+v+g +     ++  +++++++ e+leg+nky+ +k  ++q+a+k + +  +P+vL l+LkRf+++  ++   kin+++efpl+Ld
   Q: 322  YLQLDVKGCQ-----DVYASFDKYVEVERLEGDNKYHADKH-GLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLD 405
           7999999999.....99**********************96.69********************************************** PP
   S: 261  ls....pfctspeekqkekkkYeLiavvvHsGslssGHYvayvkn.ekgkWllfdDskVtevkeeevleetg.................. 327
           l+    ++++  + + ++++ Y L++v+vHsG++++GHY+a+++   +++W++fdD++Vt+ + ++ lee+                   
   Q: 406  LDrdngKYLSP-DADRNVRNLYTLHSVLVHSGGVHGGHYYAFIRPtLSDQWFKFDDERVTKEDAKRALEEQYggeeelpqtnpglnntpf 494
           *9666555555.777778**************************945677**************999997779***************** PP
   S: 328  .....staYvlfYkr 337
                s+aY+l+Y r
   Q: 495  kftkySNAYMLVYIR 509
           *************87 PP

ULD/UDP/UBQ/UBQ_Other

   S: 14   tlkvnpsdtVaeLKekiekklgippeqqrLiykGki 49
           ++++ +++t+a++Ke++ k++gip + qr +++ k 
   Q: 584  SFRIQKQMTFAQFKEEVAKEFGIPTQFQRFWLWAKR 619
           688999******************999999987443 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MTTSPPPAEQ EQQEEEEVLV PHGPHQELPN GAQPMEVVPA EPAATVENQQ IEDPPISRFT 60
WTIENLSRVS TKKLYSEIFV VGGYKWRILI FPRGNNVEFL SMYLDVADSG VLPYGWTRYA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GATCCCAGCC GTCCTTGATC CGGAAGCCTC CGCAGTCCGC ACGAGGCCTG GAACTTTCCA 60
CGGGTCCAAA ACCCCTCTCT CTCTATCGCT CCTCTCCCTT TCTCTCTCCG CCCCCCATCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0378--Hydrolase
KW-1185--Reference proteome

Interpro

IPR002083--MATH/TRAF_dom
IPR001394--Peptidase_C19_UCH
IPR008974--TRAF-like
IPR024729--USP7_ICP0-binding_dom
IPR029346--USP_C
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS50144--MATH
PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00917--MATH
PF00443--UCH
PF14533--USP7_C2
PF12436--USP7_ICP0_bdg

SMART

SM00061--MATH

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000761	Aegilops tauschii	84.82	0.00e+00	1905.00
IUUC-Bdi-014920	Brachypodium distachyon	86.57	0.00e+00	1943.00
IUUC-Cel-018219	Caenorhabditis elegans	28.53	2.00e-89	323.00
IUUC-Hvu-047749	Hordeum vulgare	92.32	0.00e+00	1696.00
IUUC-Lpe-050886	Leersia perrieri	81.01	0.00e+00	1782.00
IUUC-Oba-075755	Oryza barthii	81.85	0.00e+00	1770.00
IUUC-Obr-076857	Oryza brachyantha	86.73	0.00e+00	1937.00
IUUC-Ogl-077038	Oryza glaberrima	86.99	0.00e+00	1917.00
IUUC-Ogu-078265	Oryza glumaepatula	83.76	0.00e+00	1827.00
IUUC-Oin-079988	Oryza indica	86.41	0.00e+00	1863.00
IUUC-Olo-080297	Oryza longistaminata	82.11	0.00e+00	1774.00
IUUC-Ome-081895	Oryza meridionalis	81.66	0.00e+00	1801.00
IUUC-Oni-082409	Oryza nivara	83.96	0.00e+00	1843.00
IUUC-Opu-084122	Oryza punctata	82.07	0.00e+00	1804.00
IUUC-Oru-085101	Oryza rufipogon	83.76	0.00e+00	1828.00
IUUC-Sit-110367	Setaria italica	88.93	0.00e+00	1992.00
IUUC-Sbi-114854	Sorghum bicolor	86.48	0.00e+00	1914.00
IUUC-Tae-123595	Triticum aestivum	85.20	0.00e+00	1686.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence