iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-114855

Ensembl Protein ID

Sb07g004520.1

UniProt Accession

A0A1B6PFS8; A0A1B6PFS8_SORBI

Genbank Protein ID

KXG24536.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000766

Gene Name

SORBI_007G056100

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb07g004520	Sb07g004520.1	Sb07g004520.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	34.33	8.80e-02	32.30	IUUC-Sce-106376
E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box	34.33	8.80e-02	32.30	IUUC-Sce-106376

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MPGIASADVD YPFFFPLILL LNEFRSIGYV ACLDLSQLRR PRNQIEPFLC PPHQTVSDSI 60
ASGWVATDPI RTSFILGRLP GKEGRMEFGR RKPMSLLELC IRKAIDNLRY IESVDGIEMD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCCGGCA TCGCTTCGGC GGATGTGGAT TACCCCTTTT TTTTTCCCCT TATTCTTCTG 60
CTCAACGAAT TCCGTTCCAT AGGATATGTA GCATGTCTTG ATCTTTCCCA GCTGCGGCGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR010684--RNA_pol_II_trans_fac_SIII_A

Pfam

PF06881--Elongin_A

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0005634--C:nucleus
GO:0006355--P:regulation of transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001705	Ailuropoda melanoleuca	38.24	6.00e-06	45.40
IUUC-Apl-003659	Anas platyrhynchos	38.03	1.00e-06	47.80
IUUC-Aca-004513	Anolis carolinensis	38.03	6.00e-06	45.40
IUUC-Acl-008085	Aspergillus clavatus	35.29	1.30e-01	30.00
IUUC-Afu-008931	Aspergillus fumigatus	23.81	2.90e-02	32.30
IUUC-Ani-009161	Aspergillus nidulans	35.29	3.30e-01	28.10
IUUC-Ame-011668	Astyanax mexicanus	35.21	1.00e-06	47.40
IUUC-Bdi-014527	Brachypodium distachyon	64.74	8.00e-47	179.00
IUUC-Bol-016438	Brassica oleracea	44.32	3.00e-32	132.00
IUUC-Bra-017526	Brassica rapa	44.07	6.00e-32	130.00
IUUC-Cel-018281	Caenorhabditis elegans	25.00	2.00e-04	40.00
IUUC-Cja-018759	Callithrix jacchus	36.76	1.00e-04	41.20
IUUC-Cfa-020766	Canis familiaris	36.76	2.00e-05	43.90
IUUC-Cpo-022250	Cavia porcellus	39.71	3.00e-06	46.60
IUUC-Csa-023293	Chlorocebus sabaeus	36.76	1.00e-05	44.30
IUUC-Cgl-026733	Colletotrichum gloeosporioides	30.10	6.00e-04	37.70
IUUC-Cne-026936	Cryptococcus neoformans	20.00	1.20e-01	30.40
IUUC-Dre-027828	Danio rerio	26.42	1.00e-08	53.90
IUUC-Ete-032677	Echinops telfairi	36.62	5.00e-06	45.40
IUUC-Eca-034045	Equus caballus	33.33	9.00e-06	44.30
IUUC-Eeu-035063	Erinaceus europaeus	38.57	6.00e-06	45.40
IUUC-Fca-036488	Felis catus	36.76	2.00e-05	43.50
IUUC-Fal-037501	Ficedula albicollis	38.36	8.00e-07	48.50
IUUC-Fox-037948	Fusarium oxysporum	20.16	2.30e-01	29.30
IUUC-Fso-038123	Fusarium solani	23.74	1.00e-03	37.00
IUUC-Gmo-038614	Gadus morhua	37.14	6.00e-06	45.10
IUUC-Gga-040738	Gallus gallus	38.03	1.00e-06	47.40
IUUC-Gac-041381	Gasterosteus aculeatus	25.93	6.00e-07	48.50
IUUC-Gma-042964	Glycine max	45.35	8.00e-41	159.00
IUUC-Ggo-045139	Gorilla gorilla	36.76	1.00e-05	44.30
IUUC-Hsa-046083	Homo sapiens	36.76	1.00e-05	44.30
IUUC-Itr-048970	Ictidomys tridecemlineatus	35.29	1.00e-04	41.60
IUUC-Kpa-049376	Komagataella pastoris	25.99	5.00e-04	37.40
IUUC-Lch-050369	Latimeria chalumnae	29.41	4.00e-07	49.30
IUUC-Lpe-050727	Leersia perrieri	51.93	6.00e-47	180.00
IUUC-Loc-052347	Lepisosteus oculatus	36.62	6.00e-07	48.50
IUUC-Laf-053575	Loxodonta africana	38.24	9.00e-06	44.70
IUUC-Mcc-054823	Macaca mulatta	36.76	1.00e-05	44.30
IUUC-Meu-056878	Macropus eugenii	31.25	3.00e-04	39.30
IUUC-Mtr-057811	Medicago truncatula	46.54	1.00e-37	148.00
IUUC-Mga-059445	Meleagris gallopavo	38.36	2.00e-06	47.40
IUUC-Mmr-060665	Microcebus murinus	36.76	2.00e-05	43.90
IUUC-Mdo-062430	Monodelphis domestica	39.73	5.00e-07	48.90
IUUC-Mmu-064173	Mus musculus	36.76	2.00e-05	43.90
IUUC-Mac-065364	Musa acuminata	48.62	2.00e-44	171.00
IUUC-Mpu-066344	Mustela putorius furo	37.14	2.00e-05	44.30
IUUC-Mlu-068101	Myotis lucifugus	36.76	1.00e-05	44.30
IUUC-Nfi-068489	Neosartorya fischeri	35.29	9.50e-02	30.40
IUUC-Ont-071579	Oreochromis niloticus	36.62	2.00e-07	50.40
IUUC-Oan-072862	Ornithorhynchus anatinus	38.03	2.00e-06	47.00
IUUC-Ocu-073882	Oryctolagus cuniculus	36.76	1.00e-05	44.30
IUUC-Oba-075710	Oryza barthii	53.04	7.00e-51	192.00
IUUC-Ogl-077171	Oryza glaberrima	65.19	5.00e-59	219.00
IUUC-Ogu-078827	Oryza glumaepatula	64.84	2.00e-58	218.00
IUUC-Oin-080204	Oryza indica	53.04	6.00e-51	192.00
IUUC-Olo-081049	Oryza longistaminata	53.30	1.00e-50	192.00
IUUC-Ome-081128	Oryza meridionalis	58.06	4.00e-41	159.00
IUUC-Oni-083077	Oryza nivara	53.30	2.00e-51	195.00
IUUC-Opu-083270	Oryza punctata	52.20	4.00e-50	190.00
IUUC-Oru-084299	Oryza rufipogon	58.06	4.00e-41	159.00
IUUC-Osa-085671	Oryza sativa	59.63	3.00e-37	145.00
IUUC-Ola-086456	Oryzias latipes	36.99	8.00e-07	48.50
IUUC-Oga-087918	Otolemur garnettii	36.76	2.00e-05	43.90
IUUC-Oar-089663	Ovis aries	38.03	2.00e-06	47.00
IUUC-Ptr-091033	Pan troglodytes	36.76	2.00e-05	44.30
IUUC-Pan-092277	Papio anubis	36.76	1.00e-05	44.30
IUUC-Psi-094086	Pelodiscus sinensis	38.36	2.00e-06	47.00
IUUC-Pma-094683	Petromyzon marinus	35.62	7.00e-06	43.90
IUUC-Pfo-097334	Poecilia formosa	35.21	6.00e-07	48.50
IUUC-Pab-098345	Pongo abelii	36.76	1.00e-05	44.30
IUUC-Pop-099683	Populus trichocarpa	40.62	2.00e-23	100.00
IUUC-Pca-100737	Procavia capensis	39.71	4.00e-06	46.20
IUUC-Pva-102497	Pteropus vampyrus	38.24	8.00e-06	45.10
IUUC-Pgr-103464	Puccinia graminis	25.35	2.10e-01	27.30
IUUC-Rno-105177	Rattus norvegicus	36.76	2.00e-05	43.90
IUUC-Sce-106376	Saccharomyces cerevisiae	34.33	2.60e-02	32.30
IUUC-Sha-106480	Sarcophilus harrisii	39.44	5.00e-07	49.30
IUUC-Sja-107782	Schizosaccharomyces japonicus	24.43	4.00e-06	43.90
IUUC-Spo-108157	Schizosaccharomyces pombe	28.24	2.00e-06	44.70
IUUC-Sit-109960	Setaria italica	70.17	1.00e-58	218.00
IUUC-Sar-113255	Sorex araneus	36.76	2.00e-05	43.50
IUUC-Sre-115076	Sporisorium reilianum	26.72	7.00e-08	51.60
IUUC-Ssc-115875	Sus scrofa	38.03	2.00e-06	47.00
IUUC-Tgu-117066	Taeniopygia guttata	38.36	7.00e-07	48.50
IUUC-Tru-117881	Takifugu rubripes	35.21	9.00e-07	47.80
IUUC-Tsy-119531	Tarsius syrichta	35.21	2.00e-04	40.40
IUUC-Tni-120325	Tetraodon nigroviridis	38.03	3.00e-07	49.70
IUUC-Tae-122727	Triticum aestivum	60.75	3.00e-40	158.00
IUUC-Tur-126506	Triticum urartu	51.11	1.00e-35	142.00
IUUC-Tbe-127648	Tupaia belangeri	36.76	2.00e-05	44.30
IUUC-Ttr-129287	Tursiops truncatus	39.44	1.00e-06	48.10
IUUC-Vpa-130645	Vicugna pacos	38.03	3.00e-06	46.60
IUUC-Xtr-132709	Xenopus tropicalis	30.91	7.00e-06	45.10
IUUC-Xma-133858	Xiphophorus maculatus	35.21	7.00e-07	48.50

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence