iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099958

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000337

Gene Name

POPTRDRAFT_814858; POPTR_0001s14730g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0001s14730	POPTR_0001s14730.1	POPTR_0001s14730.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.90e-23	82.7	25	56
UBD/Beta-Prp	4.10e-44	152.1	16	184

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 3    tdsvtclaf.sd.tllvsGsdDgtikvWDlrt 32
           +dsv++l+f +  ++lv+ s+D+++++W++++
   Q: 25   SDSVSSLSFsPKaNFLVATSWDNQVRCWEITR 56
           799******9889****************876 PP

UBD/Beta-Prp

   S: 85   kcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdl.etgqclee...tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkl 171
           k + +l+  +dsv slsfsp+ ++lv++s+d+ +r+w++ ++g+ + +       hd+ v c ++++dg  ++sG+ D++v++W l +g  
   Q: 16   KSIEVLQPPSDSVSSLSFSPKANFLVATSWDNQVRCWEItRNGTTVGSvpkASISHDQPVLCSSWKDDGTTVFSGGCDKQVKMWPLLSGGQ 106
           4555566666677777777766777777777777777752344444445555556677777777777777777777777777777766666 PP
   S: 172  lrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrs 253
             t    h+ +++ +++ +++++l+++s d+t+k+wdl++++ v+t++  ++     +++ +  ++v+g++D+   +++l++
   Q: 107  PVTIAM-HDAPIKEITWIPEMNCLATASFDKTLKYWDLRQSTPVHTQQLGERC---YAMTVRYPLMVVGTADRNMVVYNLQN 184
           666655.7777777777777777777777777777777766666666554432...22222346666666666666666665 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MSAFGSAGTA NTNPNKSIEV LQPPSDSVSS LSFSPKANFL VATSWDNQVR CWEITRNGTT 60
VGSVPKASIS HDQPVLCSSW KDDGTTVFSG GCDKQVKMWP LLSGGQPVTI AMHDAPIKEI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTTATATTA CCTTTCTTTC CCTCTCTACT GTTAAAAACC CCCCTGCTGC CTGCATCTCC 60
CTCTCTCTCT CTCTCTCTCT CTCTCTCTCG TAGGTACTCT ATATTTTATT TTTCCTTGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

pop:POPTR_0001s14730g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002609	Amborella trichopoda	81.65	4.00e-164	569.00
IUUC-Cel-018563	Caenorhabditis elegans	40.72	3.00e-62	231.00
IUUC-Itr-048819	Ictidomys tridecemlineatus	50.72	1.00e-88	319.00
IUUC-Lpe-051050	Leersia perrieri	81.10	2.00e-166	577.00
IUUC-Oba-075879	Oryza barthii	81.38	6.00e-160	556.00
IUUC-Obr-076326	Oryza brachyantha	81.87	6.00e-167	579.00
IUUC-Ogl-077767	Oryza glaberrima	80.52	2.00e-166	577.00
IUUC-Oin-080219	Oryza indica	80.52	2.00e-166	577.00
IUUC-Olo-081007	Oryza longistaminata	80.52	2.00e-166	577.00
IUUC-Oni-082844	Oryza nivara	80.52	2.00e-166	577.00
IUUC-Opu-083511	Oryza punctata	77.09	6.00e-161	559.00
IUUC-Oru-085012	Oryza rufipogon	80.52	2.00e-166	577.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence