iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ola-087236

Ensembl Protein ID

ENSORLP00000016307.1

UniProt Accession

H2MCM0; H2MCM0_ORYLA

Genbank Protein ID

ENSORLP00000016307

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

BAAF04004717

Gene Name

phf2

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSORLG00000013012.1	ENSORLT00000016308.1	ENSORLP00000016307.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	4.60e-11	43.0	6	55

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           ++C +C+ +++ ++ ++eC+ C++wfH  C++   e++ p+ + + Cp+C++
   Q: 6    VYC-ICRLPYDVTQFMIECDACKDWFHGSCVGVD-EDDAPDIDIYHCPNCEK 55
           69*.******************************.*******99******86 PP

Organism

Oryzias latipes

Protein Sequence
(Fasta)

MATVPVYCIC RLPYDVTQFM IECDACKDWF HGSCVGVDED DAPDIDIYHC PNCEKTHGKS 60
TLKKKKNWSK HDTGQSTDIK AVQNGSQVFI KELRSRTFPS ADDILVKLSG CQLTLEFLEE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGACTG TACCAGTATA TTGCATCTGC AGATTACCTT ACGACGTGAC CCAGTTCATG 60
ATCGAGTGCG ATGCCTGCAA GGACTGGTTC CACGGCAGGT AAGAGCGGAT CGCCGCGCGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR003347--JmjC_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51184--JMJC
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF02373--JmjC
PF00628--PHD

SMART

SM00558--JmjC
SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002986	Amborella trichopoda	44.00	4.00e-11	61.20
IUUC-Aca-005043	Anolis carolinensis	81.60	0.00e+00	812.00
IUUC-Ame-011579	Astyanax mexicanus	72.49	1.00e-180	627.00
IUUC-Bgr-012210	Blumeria graminis	48.98	4.00e-09	56.20
IUUC-Bdi-014153	Brachypodium distachyon	41.82	5.00e-12	64.30
IUUC-Bol-015887	Brassica oleracea	39.06	1.00e-11	62.80
IUUC-Bra-018030	Brassica rapa	39.06	3.00e-12	65.50
IUUC-Dre-028285	Danio rerio	87.83	0.00e+00	834.00
IUUC-Fal-037017	Ficedula albicollis	79.65	0.00e+00	813.00
IUUC-Gga-040290	Gallus gallus	80.09	0.00e+00	816.00
IUUC-Hsa-046760	Homo sapiens	75.31	0.00e+00	791.00
IUUC-Hvu-047723	Hordeum vulgare	35.80	5.00e-11	60.80
IUUC-Lpe-051400	Leersia perrieri	43.64	7.00e-12	63.50
IUUC-Loc-051927	Lepisosteus oculatus	71.99	0.00e+00	1342.00
IUUC-Mmr-061132	Microcebus murinus	75.10	0.00e+00	788.00
IUUC-Mmu-063458	Mus musculus	76.62	0.00e+00	785.00
IUUC-Mac-065355	Musa acuminata	43.14	4.00e-11	61.20
IUUC-Ont-071935	Oreochromis niloticus	87.52	0.00e+00	1515.00
IUUC-Oba-075188	Oryza barthii	43.64	3.00e-11	61.60
IUUC-Obr-076353	Oryza brachyantha	39.29	2.00e-11	64.30
IUUC-Ogl-077260	Oryza glaberrima	43.64	3.00e-11	61.60
IUUC-Ogu-078663	Oryza glumaepatula	43.64	3.00e-12	64.70
IUUC-Oin-079894	Oryza indica	43.64	3.00e-12	64.70
IUUC-Olo-080411	Oryza longistaminata	43.64	2.00e-12	65.90
IUUC-Ome-081623	Oryza meridionalis	43.64	5.00e-12	63.90
IUUC-Oni-082587	Oryza nivara	43.64	3.00e-12	64.70
IUUC-Opu-083591	Oryza punctata	41.82	1.00e-11	62.40
IUUC-Oru-084597	Oryza rufipogon	43.64	3.00e-12	64.70
IUUC-Osa-086057	Oryza sativa	43.64	3.00e-12	64.70
IUUC-Ptr-091328	Pan troglodytes	78.65	0.00e+00	770.00
IUUC-Pfo-096227	Poecilia formosa	80.81	0.00e+00	1498.00
IUUC-Pop-098853	Populus trichocarpa	38.46	8.00e-12	63.50
IUUC-Ppe-101758	Prunus persica	44.00	3.00e-11	61.60
IUUC-Sit-110474	Setaria italica	47.27	4.00e-13	67.80
IUUC-Sly-111450	Solanum lycopersicum	44.00	2.00e-11	62.40
IUUC-Stu-112123	Solanum tuberosum	44.00	4.00e-11	61.60
IUUC-Sbi-114098	Sorghum bicolor	47.27	7.00e-13	67.00
IUUC-Tgu-117091	Taeniopygia guttata	79.44	0.00e+00	810.00
IUUC-Tru-118118	Takifugu rubripes	77.64	0.00e+00	1508.00
IUUC-Tni-120632	Tetraodon nigroviridis	75.46	0.00e+00	1461.00
IUUC-Tca-121518	Theobroma cacao	44.00	3.00e-11	61.60
IUUC-Tae-125802	Triticum aestivum	41.82	4.00e-12	65.10
IUUC-Tur-126461	Triticum urartu	41.82	1.00e-12	65.90
IUUC-Ttr-128194	Tursiops truncatus	77.27	0.00e+00	782.00
IUUC-Vvi-131614	Vitis vinifera	44.00	3.00e-11	61.60
IUUC-Xma-134037	Xiphophorus maculatus	80.65	0.00e+00	1485.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence