iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112868

Ensembl Protein ID

PGSC0003DMT400093622

UniProt Accession

M1DSC6; M1DSC6_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400043193	PGSC0003DMT400093622	PGSC0003DMT400093622

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	9.90e-06	27.2	118	160

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl++f  +d ++ lp C H+fh +C+  w         + +CPlCr
   Q: 118  CAVCLCEFesDDKLRWLPkCSHAFHMECIDTW------LLSHSTCPLCR 160
           ********9966699999**************......89999*****8 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MNQQLSLLQP PPPPFSTHDS SGGGGLFNLN NKVSPSILLV IIILAIIFFI SGLLHLAVRC 60
LLRPSNRDPD DLDNVTALQG QLQQLFNLHD AGVDQSFIDT LPVFNYKSII GVKDPFDCAV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAATCAGC AATTATCCCT TCTTCAACCA CCTCCACCCC CATTTTCTAC TCATGATTCT 60
AGTGGTGGTG GTGGTCTTTT CAATTTGAAT AACAAGGTTA GTCCAAGTAT ACTTCTAGTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

sot:102587354

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002500	Amborella trichopoda	44.92	7.00e-83	300.00
IUUC-Aly-005920	Arabidopsis lyrata	78.68	2.00e-48	185.00
IUUC-Ath-007441	Arabidopsis thaliana	79.05	3.00e-46	177.00
IUUC-Ago-007872	Ashbya gossypii	34.88	4.00e-12	62.80
IUUC-Bdi-014934	Brachypodium distachyon	67.28	3.00e-45	175.00
IUUC-Bol-015406	Brassica oleracea	46.91	3.00e-75	274.00
IUUC-Bra-016948	Brassica rapa	46.91	6.00e-76	276.00
IUUC-Dme-032187	Drosophila melanogaster	38.14	2.00e-15	77.00
IUUC-Gma-042822	Glycine max	53.54	6.00e-97	346.00
IUUC-Hvu-047745	Hordeum vulgare	37.79	1.00e-51	195.00
IUUC-Lpe-051680	Leersia perrieri	41.60	5.00e-60	224.00
IUUC-Mtr-058782	Medicago truncatula	54.58	6.00e-104	370.00
IUUC-Mac-064639	Musa acuminata	44.98	1.00e-86	312.00
IUUC-Oba-075403	Oryza barthii	40.38	6.00e-65	240.00
IUUC-Obr-076503	Oryza brachyantha	39.30	4.00e-59	220.00
IUUC-Ogl-077574	Oryza glaberrima	40.59	2.00e-64	238.00
IUUC-Ogu-077986	Oryza glumaepatula	40.38	2.00e-64	238.00
IUUC-Oin-079091	Oryza indica	40.51	3.00e-65	241.00
IUUC-Olo-080854	Oryza longistaminata	68.00	1.00e-46	179.00
IUUC-Ome-081627	Oryza meridionalis	41.21	2.00e-65	241.00
IUUC-Oni-082260	Oryza nivara	40.59	2.00e-64	238.00
IUUC-Opu-083578	Oryza punctata	40.49	8.00e-63	233.00
IUUC-Oru-084794	Oryza rufipogon	40.59	2.00e-64	238.00
IUUC-Osa-085348	Oryza sativa	40.38	2.00e-64	238.00
IUUC-Ppa-095806	Physcomitrella patens	37.42	5.00e-39	154.00
IUUC-Pop-099449	Populus trichocarpa	55.40	2.00e-111	394.00
IUUC-Ppe-101557	Prunus persica	56.17	7.00e-106	376.00
IUUC-Smo-109112	Selaginella moellendorffii	73.13	3.00e-28	114.00
IUUC-Sit-109852	Setaria italica	41.23	1.00e-62	233.00
IUUC-Sly-111133	Solanum lycopersicum	91.74	0.00e+00	790.00
IUUC-Sbi-114154	Sorghum bicolor	40.05	3.00e-54	204.00
IUUC-Tca-121042	Theobroma cacao	58.42	5.00e-108	383.00
IUUC-Tae-123826	Triticum aestivum	40.24	1.00e-53	202.00
IUUC-Tur-126047	Triticum urartu	41.40	6.00e-51	193.00
IUUC-Vvi-130906	Vitis vinifera	55.94	2.00e-110	391.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence