iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014109

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000882

Gene Name

LOC100821215; BRADI_3g39110

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI3G39110	BRADI3G39110.1	BRADI3G39110.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.50e-11	43.6	95	137

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplv..lpCgHvfhadClqkwpglknssskefrCPlCr 46
           C +Cl +f+ + +v  lpCgH+fh+dCl+kw     + + +++CPlCr
   Q: 95   CRVCLASFEPESVVnrLPCGHLFHRDCLEKW-----LGYDNATCPLCR 137
           9*******7776663377*************.....89*********8 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MGISSMPAPK DSLFIFLLYN TAVSIAVLSN LLRGAMAFLG IPVPGEDGDE HIFAMVGSSA 60
STAAAAGPSL ADRFRSSFRP ALFGRRAHGA AAADCRVCLA SFEPESVVNR LPCGHLFHRD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGCATCT CCAGCATGCC GGCGCCCAAG GACAGCCTCT TCATCTTCCT CCTGTACAAC 60
ACGGCGGTGT CCATCGCCGT GCTCTCCAAC CTGCTGCGCG GCGCCATGGC CTTCCTCGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001841--Znf_RING
IPR011016--Znf_RING-CH
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING
SM00744--RINGv

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

bdi:100821215

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-006955	Arabidopsis thaliana	33.77	2.00e-19	87.40
IUUC-Ame-011513	Astyanax mexicanus	50.00	5.00e-10	58.90
IUUC-Cre-022607	Chlamydomonas reinhardtii	37.14	8.00e-08	49.70
IUUC-Dre-027675	Danio rerio	47.73	1.00e-09	57.40
IUUC-Gma-043655	Glycine max	38.16	2.00e-23	100.00
IUUC-Lpe-051313	Leersia perrieri	72.22	3.00e-46	176.00
IUUC-Mor-056980	Magnaporthe oryzae	38.18	2.00e-09	57.00
IUUC-Mac-064822	Musa acuminata	58.16	8.00e-23	98.60
IUUC-Opr-070664	Ochotona princeps	47.73	1.00e-09	58.20
IUUC-Ogl-077775	Oryza glaberrima	71.92	9.00e-38	148.00
IUUC-Oin-079546	Oryza indica	71.92	9.00e-38	148.00
IUUC-Ome-081545	Oryza meridionalis	64.05	1.00e-39	154.00
IUUC-Oni-082196	Oryza nivara	71.92	9.00e-38	148.00
IUUC-Opu-083519	Oryza punctata	72.61	8.00e-43	165.00
IUUC-Oru-084312	Oryza rufipogon	71.23	2.00e-37	147.00
IUUC-Osa-086234	Oryza sativa	71.92	9.00e-38	148.00
IUUC-Pop-099448	Populus trichocarpa	39.60	7.00e-24	102.00
IUUC-Ppe-101936	Prunus persica	36.71	2.00e-22	97.40
IUUC-Sly-111064	Solanum lycopersicum	35.54	9.00e-16	74.70
IUUC-Stu-112754	Solanum tuberosum	35.10	1.00e-19	88.20
IUUC-Tca-121106	Theobroma cacao	41.96	5.00e-26	109.00
IUUC-Vvi-131394	Vitis vinifera	37.76	4.00e-23	100.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence