iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-005746

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Nucleotide binding protein

Genbank Nucleotide ID

GL348713

Gene Name

ELP2; ARALYDRAFT_891853

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
scaffold_104647.1	scaffold_104647.1	scaffold_104647.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.00e-42	142.0	220	260
UBD/Beta-Prp	2.40e-57	195.1	610	837

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf........sdtl.....lvsGsdDgtikvWDl 30
           gHtd++++l+f           +     lvs+s D++i++W l
   Q: 220  GHTDWIRSLDFslplhsteE--TansimLVSSSQDKVIRIWKL 260
           8**********999985431..2566779************96 PP

UBD/Beta-Prp

   S: 21   dksllatgsrdgt.....ikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdls.......tgkcvhtlkghedsvlsl 100
           +++l+a++++ ++     i +w+v t+k++ +l++h+ +vt ++fs d+ +l+++s+Dr+  v++++       + k + ++++h++ ++++
   Q: 610  KGKLVASSCKAQSasmaeIWLWEVGTWKAVGRLQSHSLTVTHLEFSYDDTLLLSVSRDRHFSVFSIQrtdngdvSHKLMAKVEAHKRIIWAC 701
           5666666665443222227899******************************************9999998888888888899********* PP
   S: 101  sfspsgdklvsGshdrtirvwdletgqclee......tlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdl..........ktgkllrtl 175
           s++p g+ +++ s+d+t+++w +e++  +++      + s  ++v ++   h+++  +++ G+  + + lW++          +t+ l  +l
   Q: 702  SWNPFGHQFATSSRDKTVKIWSIENDARIKQilalpqFGSSVTAVAWTGLDHKEKsGCVAVGMESGLIELWNIkiiekeegttATAALALRL 793
           *******************************99887755555555555555555559*********************99999555555555 PP
   S: 176  ...tgghtdsvyslsfdsng........kelvsgsldgtvklwdl 209
                 h ++v+ l+++++           l s+++d+ v+++++
   Q: 794  epfMC-HVSAVNRLAWRPTEkcesnqrlLTLTSCGDDNCVRVFNF 837
           55366.*********88888888887888999**********997 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MSLENTKVEA KRVFIGAGCN RVVNNVSWGA SGLVSFGAQN AVAVFCPKTA QILTTLPGHK 60
ASVNCTHWLP TSKFAFKAKN LDRHYLLSGD SDGIIILWEL SALHNNWRHV LQLPLSHKKG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAATCTCCTT CTGATAAAAG ATGTCATTAG AAAACACAAA AGTCGAAGCG AAGAGAGTGT 60
TCATAGGAGC AGGATGCAAC AGAGTCGTCA ATAACGTCTC TTGGGGAGCT TCTGGTCTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

aly:ARALYDRAFT_891853

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000056	Aegilops tauschii	59.60	0.00e+00	956.00
IUUC-Aml-002049	Ailuropoda melanoleuca	34.39	1.00e-102	367.00
IUUC-Atr-002456	Amborella trichopoda	58.36	0.00e+00	960.00
IUUC-Apl-004053	Anas platyrhynchos	36.86	1.00e-124	440.00
IUUC-Aca-004535	Anolis carolinensis	32.00	1.00e-108	387.00
IUUC-Ath-006664	Arabidopsis thaliana	95.70	0.00e+00	1576.00
IUUC-Ago-007971	Ashbya gossypii	28.79	3.00e-83	302.00
IUUC-Acl-008173	Aspergillus clavatus	32.36	2.00e-100	360.00
IUUC-Afl-008665	Aspergillus flavus	27.01	1.00e-37	150.00
IUUC-Afu-008976	Aspergillus fumigatus	30.32	3.00e-91	328.00
IUUC-Ani-009284	Aspergillus nidulans	30.91	6.00e-98	351.00
IUUC-Ang-009809	Aspergillus niger	30.42	3.00e-96	345.00
IUUC-Aor-009959	Aspergillus oryzae	31.72	1.00e-97	350.00
IUUC-Ate-010442	Aspergillus terreus	30.16	4.00e-96	345.00
IUUC-Ame-011409	Astyanax mexicanus	34.73	6.00e-119	421.00
IUUC-Bgr-012137	Blumeria graminis	32.79	4.00e-106	378.00
IUUC-Bta-012892	Bos taurus	35.16	8.00e-124	437.00
IUUC-Bci-013944	Botrytis cinerea	30.15	4.00e-96	345.00
IUUC-Bdi-014512	Brachypodium distachyon	60.43	0.00e+00	1013.00
IUUC-Bol-015741	Brassica oleracea	90.81	0.00e+00	1524.00
IUUC-Bra-017367	Brassica rapa	90.44	0.00e+00	1518.00
IUUC-Cel-018712	Caenorhabditis elegans	29.04	4.00e-68	252.00
IUUC-Cja-018865	Callithrix jacchus	32.12	7.00e-112	397.00
IUUC-Cfa-021006	Canis familiaris	35.45	2.00e-122	432.00
IUUC-Cpo-021370	Cavia porcellus	34.94	3.00e-121	428.00
IUUC-Csa-023845	Chlorocebus sabaeus	34.67	1.00e-120	427.00
IUUC-Cho-024640	Choloepus hoffmanni	35.14	5.00e-77	281.00
IUUC-Cin-025772	Ciona intestinalis	32.68	7.00e-99	354.00
IUUC-Csv-025891	Ciona savignyi	33.41	1.00e-108	386.00
IUUC-Cgl-026443	Colletotrichum gloeosporioides	30.75	2.00e-95	343.00
IUUC-Cne-027081	Cryptococcus neoformans	30.71	1.00e-90	327.00
IUUC-Cme-027225	Cyanidioschyzon merolae	25.78	7.00e-48	185.00
IUUC-Dre-028250	Danio rerio	36.55	1.00e-120	426.00
IUUC-Dno-028847	Dasypus novemcinctus	34.46	9.00e-122	430.00
IUUC-Dor-030351	Dipodomys ordii	33.64	4.00e-117	414.00
IUUC-Dse-031317	Dothistroma septosporum	32.58	7.00e-89	321.00
IUUC-Dme-032019	Drosophila melanogaster	33.33	8.00e-126	443.00
IUUC-Ete-033194	Echinops telfairi	34.24	1.00e-69	257.00
IUUC-Eca-033779	Equus caballus	35.46	2.00e-123	435.00
IUUC-Eeu-034790	Erinaceus europaeus	33.40	6.00e-69	254.00
IUUC-Fca-036090	Felis catus	35.99	3.00e-119	422.00
IUUC-Fal-037663	Ficedula albicollis	38.38	7.00e-115	407.00
IUUC-Fox-037828	Fusarium oxysporum	31.99	1.00e-105	377.00
IUUC-Fso-038462	Fusarium solani	33.13	4.00e-104	372.00
IUUC-Gmo-039450	Gadus morhua	33.45	3.00e-123	435.00
IUUC-Ggr-040023	Gaeumannomyces graminis	29.38	5.00e-95	342.00
IUUC-Gga-040480	Gallus gallus	37.22	1.00e-134	473.00
IUUC-Gac-041544	Gasterosteus aculeatus	35.69	6.00e-126	444.00
IUUC-Gma-044048	Glycine max	66.51	0.00e+00	1156.00
IUUC-Ggo-045381	Gorilla gorilla	32.27	3.00e-109	389.00
IUUC-Hsa-046096	Homo sapiens	31.70	5.00e-113	401.00
IUUC-Hvu-047494	Hordeum vulgare	60.60	0.00e+00	1026.00
IUUC-Itr-048823	Ictidomys tridecemlineatus	33.24	4.00e-88	318.00
IUUC-Kpa-049241	Komagataella pastoris	30.86	4.00e-85	308.00
IUUC-Lch-050512	Latimeria chalumnae	38.41	5.00e-118	418.00
IUUC-Lpe-051448	Leersia perrieri	59.28	0.00e+00	1003.00
IUUC-Loc-051882	Lepisosteus oculatus	35.06	4.00e-133	468.00
IUUC-Lma-053023	Leptosphaeria maculans	31.26	4.00e-97	348.00
IUUC-Laf-054519	Loxodonta africana	34.78	6.00e-122	431.00
IUUC-Mcc-055580	Macaca mulatta	32.51	3.00e-113	402.00
IUUC-Meu-056606	Macropus eugenii	43.83	6.00e-35	142.00
IUUC-Mor-057109	Magnaporthe oryzae	32.08	5.00e-108	384.00
IUUC-Mpo-057297	Magnaporthe poae	28.98	3.00e-92	332.00
IUUC-Mtr-058348	Medicago truncatula	65.08	0.00e+00	1119.00
IUUC-Mla-059159	Melampsora laricipopulina	29.04	1.00e-80	293.00
IUUC-Mga-059778	Meleagris gallopavo	35.58	5.00e-77	281.00
IUUC-Mvi-060447	Microbotryum violaceum	31.57	1.00e-98	353.00
IUUC-Mmr-061139	Microcebus murinus	33.01	1.00e-113	403.00
IUUC-Mdo-061866	Monodelphis domestica	34.75	1.00e-128	453.00
IUUC-Mmu-063390	Mus musculus	35.17	4.00e-121	428.00
IUUC-Mac-064693	Musa acuminata	62.72	0.00e+00	1070.00
IUUC-Mpu-066547	Mustela putorius furo	34.96	1.00e-116	413.00
IUUC-Mlu-067156	Myotis lucifugus	35.58	1.00e-125	443.00
IUUC-Nfi-068616	Neosartorya fischeri	31.43	2.00e-94	339.00
IUUC-Ncr-068915	Neurospora crassa	29.46	3.00e-91	329.00
IUUC-Nle-069958	Nomascus leucogenys	34.01	3.00e-115	409.00
IUUC-Opr-071093	Ochotona princeps	33.92	2.00e-55	209.00
IUUC-Ont-072178	Oreochromis niloticus	33.92	1.00e-124	439.00
IUUC-Oan-073667	Ornithorhynchus anatinus	33.56	4.00e-112	398.00
IUUC-Ocu-074662	Oryctolagus cuniculus	33.95	7.00e-122	430.00
IUUC-Oba-075577	Oryza barthii	60.74	0.00e+00	1028.00
IUUC-Obr-076566	Oryza brachyantha	61.11	0.00e+00	1027.00
IUUC-Ogl-077054	Oryza glaberrima	60.62	0.00e+00	1031.00
IUUC-Ogu-078846	Oryza glumaepatula	60.74	0.00e+00	1028.00
IUUC-Oin-079084	Oryza indica	60.26	0.00e+00	1020.00
IUUC-Olo-080933	Oryza longistaminata	57.23	0.00e+00	904.00
IUUC-Ome-081500	Oryza meridionalis	58.19	0.00e+00	957.00
IUUC-Oni-082352	Oryza nivara	60.14	0.00e+00	1017.00
IUUC-Opu-084116	Oryza punctata	58.89	0.00e+00	1000.00
IUUC-Oru-085249	Oryza rufipogon	60.26	0.00e+00	1020.00
IUUC-Osa-086270	Oryza sativa	60.26	0.00e+00	1020.00
IUUC-Ola-086625	Oryzias latipes	32.26	2.00e-102	366.00
IUUC-Olu-087638	Ostreococcus lucimarinus	33.67	4.00e-94	338.00
IUUC-Oga-088634	Otolemur garnettii	30.12	8.00e-98	351.00
IUUC-Oar-089475	Ovis aries	35.43	3.00e-123	435.00
IUUC-Ptr-091131	Pan troglodytes	33.87	1.00e-119	423.00
IUUC-Pan-092869	Papio anubis	34.55	4.00e-120	425.00
IUUC-Psi-093146	Pelodiscus sinensis	36.93	5.00e-114	404.00
IUUC-Pma-094479	Petromyzon marinus	38.79	9.00e-108	384.00
IUUC-Pno-095061	Phaeosphaeria nodorum	27.27	2.00e-55	209.00
IUUC-Ppa-095618	Physcomitrella patens	48.25	0.00e+00	781.00
IUUC-Pfo-096816	Poecilia formosa	35.90	2.00e-132	465.00
IUUC-Pab-097548	Pongo abelii	33.98	2.00e-119	422.00
IUUC-Pop-099643	Populus trichocarpa	69.24	0.00e+00	1189.00
IUUC-Pca-100983	Procavia capensis	34.08	3.00e-59	222.00
IUUC-Ppe-101301	Prunus persica	67.84	0.00e+00	1145.00
IUUC-Pva-102460	Pteropus vampyrus	35.14	2.00e-118	419.00
IUUC-Pgr-103507	Puccinia graminis	30.49	6.00e-89	321.00
IUUC-Ptt-103892	Puccinia triticina	30.24	5.00e-78	285.00
IUUC-Pte-104283	Pyrenophora teres	31.01	6.00e-96	344.00
IUUC-Pyt-104465	Pyrenophora triticirepentis	31.19	2.00e-94	340.00
IUUC-Rno-105842	Rattus norvegicus	35.08	1.00e-123	436.00
IUUC-Sce-106459	Saccharomyces cerevisiae	28.25	1.00e-80	293.00
IUUC-Sha-106586	Sarcophilus harrisii	28.24	8.00e-79	288.00
IUUC-Sja-107868	Schizosaccharomyces japonicus	31.12	2.00e-92	333.00
IUUC-Spo-108302	Schizosaccharomyces pombe	30.30	4.00e-92	332.00
IUUC-Smo-108861	Selaginella moellendorffii	48.20	0.00e+00	774.00
IUUC-Sit-109915	Setaria italica	59.98	0.00e+00	1031.00
IUUC-Sly-111714	Solanum lycopersicum	66.63	0.00e+00	1131.00
IUUC-Stu-112631	Solanum tuberosum	67.15	0.00e+00	1152.00
IUUC-Sar-113200	Sorex araneus	32.84	8.00e-75	274.00
IUUC-Sbi-114582	Sorghum bicolor	60.36	0.00e+00	1039.00
IUUC-Sre-115001	Sporisorium reilianum	25.98	1.00e-39	158.00
IUUC-Ssc-115519	Sus scrofa	36.31	4.00e-127	448.00
IUUC-Tgu-116987	Taeniopygia guttata	36.56	1.00e-124	439.00
IUUC-Tru-118476	Takifugu rubripes	34.40	3.00e-119	422.00
IUUC-Tsy-119230	Tarsius syrichta	41.21	1.00e-24	108.00
IUUC-Tni-120448	Tetraodon nigroviridis	32.55	2.00e-45	177.00
IUUC-Tca-121650	Theobroma cacao	69.08	0.00e+00	1200.00
IUUC-Tre-122086	Trichoderma reesei	32.17	1.00e-93	337.00
IUUC-Tvi-122397	Trichoderma virens	31.58	1.00e-88	320.00
IUUC-Tae-123972	Triticum aestivum	60.33	0.00e+00	1021.00
IUUC-Tur-126578	Triticum urartu	60.33	0.00e+00	1018.00
IUUC-Tme-126927	Tuber melanosporum	30.62	3.00e-96	345.00
IUUC-Tbe-127922	Tupaia belangeri	40.62	4.00e-40	159.00
IUUC-Ttr-128918	Tursiops truncatus	35.24	9.00e-124	437.00
IUUC-Uma-129474	Ustilago maydis	25.73	5.00e-41	162.00
IUUC-Vda-129944	Verticillium dahliae	31.30	4.00e-95	342.00
IUUC-Vpa-130693	Vicugna pacos	38.05	1.00e-118	420.00
IUUC-Vvi-130949	Vitis vinifera	68.36	0.00e+00	1186.00
IUUC-Xtr-132639	Xenopus tropicalis	31.69	5.00e-117	414.00
IUUC-Xma-134223	Xiphophorus maculatus	36.65	2.00e-80	292.00
IUUC-Yli-134601	Yarrowia lipolytica	32.24	6.00e-92	331.00
IUUC-Zma-135952	Zea mays	60.86	0.00e+00	1042.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence