iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sit-110580

Ensembl Protein ID

Si013218m

UniProt Accession

K3YG50; K3YG50_SETIT

Genbank Protein ID

KQL02643.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM003533

Gene Name

LOC101766015; SETIT_013218mg

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Si013218m.g	Si013218m	Si013218m
Si013218m.g	Si013230m	Si013230m

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.10e-21	75.1	811	839

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 5    svtclaf.sd.tllvsGsdDgtikvWDlr 31
           +v++ ++ ++ + lv+ s+Dg++ +WD++
   Q: 811  GVNATQWlHGePVLVTVSGDGSVGMWDVT 839
           599*****6669***************97 PP

Organism

Setaria italica

Protein Sequence
(Fasta)

MPEPQAILPL RALPPDAPLP LPVPAPFHPQ TPTPASAAPA TPPNPTPPQP QTPAAPPPSS 60
TRPPHPWEIA ARAWLESFPD GRPPTEPEVD VYIDAHRPEL PSLPRSQLHQ RLLALRGDQV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCGGAGC CGCAGGCCAT CCTCCCGCTC CGCGCGCTCC CGCCGGACGC GCCGCTCCCC 60
CTCCCCGTCC CCGCGCCGTT CCACCCCCAA ACCCCTACCC CCGCGTCGGC CGCCCCGGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0677--Repeat
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0853--WD repeat

Interpro

IPR002469--Peptidase_S9B_N
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0016021--C:integral component of membrane

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000846	Aegilops tauschii	75.48	0.00e+00	984.00
IUUC-Atr-002668	Amborella trichopoda	50.23	0.00e+00	725.00
IUUC-Bdi-014501	Brachypodium distachyon	83.37	0.00e+00	1337.00
IUUC-Lpe-051545	Leersia perrieri	73.81	0.00e+00	1184.00
IUUC-Mpo-057324	Magnaporthe poae	25.00	1.00e-06	48.50
IUUC-Mac-064887	Musa acuminata	75.46	8.00e-117	412.00
IUUC-Oba-074978	Oryza barthii	77.39	0.00e+00	874.00
IUUC-Obr-076372	Oryza brachyantha	80.56	0.00e+00	1118.00
IUUC-Ogl-076950	Oryza glaberrima	82.15	0.00e+00	1322.00
IUUC-Ogu-078500	Oryza glumaepatula	65.54	0.00e+00	896.00
IUUC-Oin-079488	Oryza indica	84.78	0.00e+00	863.00
IUUC-Olo-080491	Oryza longistaminata	71.37	0.00e+00	935.00
IUUC-Oni-082022	Oryza nivara	65.14	0.00e+00	905.00
IUUC-Opu-083211	Oryza punctata	81.30	0.00e+00	1299.00
IUUC-Oru-085018	Oryza rufipogon	64.05	0.00e+00	751.00
IUUC-Osa-085998	Oryza sativa	82.12	0.00e+00	1308.00
IUUC-Ppa-095605	Physcomitrella patens	37.66	2.00e-138	486.00
IUUC-Sja-107870	Schizosaccharomyces japonicus	22.29	3.00e-14	73.20
IUUC-Spo-108270	Schizosaccharomyces pombe	24.54	3.00e-10	59.70
IUUC-Smo-109202	Selaginella moellendorffii	51.08	8.00e-132	462.00
IUUC-Sbi-114718	Sorghum bicolor	89.52	0.00e+00	1405.00
IUUC-Tae-125757	Triticum aestivum	81.95	0.00e+00	1278.00
IUUC-Tur-126661	Triticum urartu	83.48	0.00e+00	761.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence