iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099520

UUCD1 version

UUC-PoT-00248

Ensembl Protein ID

POPTR_0011s09640.2

UniProt Accession

U5G1U7; U5G1U7_POPTR

Genbank Protein ID

ERP55451.1; ERP55452.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000347; CM000347

Gene Name

POPTR_0011s09640g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0011s09640	POPTR_0011s09640.2	POPTR_0011s09640.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/HECT	1.50e-117	393.8	3416	3754
UBD/Alpha-Helix/UBA	2.40e-08	35.0	1291	1330
UBD/Alpha-Helix/UBM	9.90e-13	48.4	2690	2715

Active Site

Position(s)	Description	Evidence
3722	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU00104}

Domain Profile

E3 activity/HECT

   S: 3    sdlkkrlevefvgEegldlgGvtreflallskelqnpdlglflysendketlqpnpdsglknpehlklFeflGrllgkalqdgrlldlp 91
           +dl+ rl+v+f+gEeg+d+gG+tre+++lls+ ++++ + lf ++ +++ t+qpnp+s ++ +ehl++F+f+Gr++ kal+dg+lld+ 
   Q: 3416 QDLRGRLNVQFQGEEGIDAGGLTREWYQLLSRVVFDKGALLF-TTVGNDVTFQPNPNSVYQ-TEHLSYFKFVGRVVSKALFDGQLLDVY 3502
           7999**********************************9999.566688999******986.5************************** PP
   S: 92   lsksfyklllgkklsledleevdpelykslkeikenaesdieelgldltfsvseei...lgetkeeeLkpgGenipVtneNkeeYvklv 177
           +++sfyk++lg k++++d+e+vdp++yk+lk+++en+ sdi +l++ +  +++++i     +++++eLkpgG+ni+Vt+e k+eYv+lv
   Q: 3503 FTRSFYKHILGAKVTYHDIEAVDPDYYKNLKWMLENDVSDIPDLTFSMDADEEKHIlyeKTQVTDYELKPGGRNIRVTEETKHEYVDLV 3591
           ************************************7777777666666555554484444455677********************** PP
   S: 178  veyrlkegikeqveafreGfneviplellslFteeelellicGeeeidvedlkketkykggytedspaiqwFwevleefsseerkafLq 266
           ++++l++ i+ q+++f eGfne++p el+s+F+ +elelli+G +eid++dlk++t+y+g yt+ s ++qwFwev+++f++e+ +++Lq
   Q: 3592 ADHILTNAIRPQINSFLEGFNELVPRELISIFNDKELELLISGLPEIDLDDLKANTEYTG-YTPASGVVQWFWEVVKGFNKEDMARLLQ 3679
           **********************************************************66.**************************** PP
   S: 267  FvTgssrlPlgGfaelk....prlfvirk.dasddrlPssnTCfnyLkLPeYsskeilkekLlyAieet.kgFel 335
           FvTg+s++Pl+Gf++l+    p++ +i+k +++++rlPs++TCfn+L+LPeY+s e+l+e+Ll+Ai+e+ +gF++
   Q: 3680 FVTGTSKVPLEGFKALQgisgPQKLQIHKaYGAPERLPSAHTCFNQLDLPEYTSGEQLQERLLLAIHEAsEGFGF 3754
           *****************************99999***********************************9***85 PP

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMGFdreealqaLraa.nnnleaAveyLldg 41
           de  ++ +veMGF+r +a +aLr+   n++e+A+e+L+++
   Q: 1291 DENTIAMIVEMGFTRARAEEALRRVeTNSVEMAMEWLFSH 1330
           7888999*****************66************97 PP

UBD/Alpha-Helix/UBM

   S: 3    sqvDpeVfsqLPeeiQeEvmaelrqq 28
           +++Dpe++++LP++iQ+Ev+a +r q
   Q: 2690 EDIDPEFLAALPPDIQAEVLAQQRAQ 2715
           79*******************99976 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MTKLKKRRST EVPPKIKSII NGVITSPLEN IEEPLKGFVW EFDKGDFHHW VDLFNHFDSY 60
FEKHIKPRKD LQVEDNFLES DPPFPREAVL QILHVIRIIL ENCTNKHFYS SYEQHLSNLL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AATTGATTAT AAATGCTTGT CTAAATCACC ATGACAAAGC TTAAGAAACG GAGGTCTACA 60
GAAGTGGTCA GTCGGTGTTT GTTTTCTTTC ACTCTTTTTT TATTAATTTA TCTAATTTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase
KW-0833--Ubl conjugation pathway

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR025527--DUF4414
IPR010309--E3_Ub_ligase_DUF908
IPR010314--E3_Ub_ligase_DUF913
IPR000569--HECT_dom
IPR015940--UBA
IPR009060--UBA-like
IPR003903--UIM_dom

PROSITE

PS50237--HECT
PS50030--UBA
PS50330--UIM

Pfam

PF14377--DUF4414
PF06012--DUF908
PF06025--DUF913
PF00632--HECT
PF00627--UBA

SMART

SM00119--HECTc
SM00165--UBA

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

pop:POPTR_0011s09640g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003044	Amborella trichopoda	61.09	0.00e+00	2356.00
IUUC-Apl-003513	Anas platyrhynchos	45.57	2.00e-93	336.00
IUUC-Aly-006083	Arabidopsis lyrata	63.52	0.00e+00	4235.00
IUUC-Ath-007472	Arabidopsis thaliana	63.86	0.00e+00	4365.00
IUUC-Bra-016637	Brassica rapa	60.81	0.00e+00	3985.00
IUUC-Cre-022900	Chlamydomonas reinhardtii	61.31	1.00e-156	545.00
IUUC-Fal-037275	Ficedula albicollis	45.82	7.00e-94	337.00
IUUC-Gma-043112	Glycine max	71.31	0.00e+00	4687.00
IUUC-Ggo-044449	Gorilla gorilla	45.32	1.00e-92	332.00
IUUC-Lpe-050915	Leersia perrieri	57.13	0.00e+00	3621.00
IUUC-Meu-056436	Macropus eugenii	41.37	3.00e-78	286.00
IUUC-Mtr-058088	Medicago truncatula	69.08	0.00e+00	4707.00
IUUC-Mga-059481	Meleagris gallopavo	45.32	2.00e-94	339.00
IUUC-Mac-065557	Musa acuminata	53.75	0.00e+00	1563.00
IUUC-Oba-075252	Oryza barthii	57.55	0.00e+00	3627.00
IUUC-Obr-076762	Oryza brachyantha	57.65	0.00e+00	3605.00
IUUC-Ogl-077590	Oryza glaberrima	59.18	0.00e+00	1283.00
IUUC-Ogu-077981	Oryza glumaepatula	56.19	0.00e+00	2305.00
IUUC-Oin-079663	Oryza indica	56.00	0.00e+00	3362.00
IUUC-Olo-080326	Oryza longistaminata	57.45	0.00e+00	3611.00
IUUC-Oni-082342	Oryza nivara	57.50	0.00e+00	3654.00
IUUC-Opu-083428	Oryza punctata	57.68	0.00e+00	3619.00
IUUC-Oru-084559	Oryza rufipogon	57.55	0.00e+00	3626.00
IUUC-Osa-086200	Oryza sativa	59.45	0.00e+00	1303.00
IUUC-Ptr-091382	Pan troglodytes	45.32	1.00e-92	333.00
IUUC-Psi-093298	Pelodiscus sinensis	46.15	5.00e-93	334.00
IUUC-Ppa-095657	Physcomitrella patens	50.07	0.00e+00	1773.00
IUUC-Ppe-102109	Prunus persica	76.48	0.00e+00	5184.00
IUUC-Rno-105600	Rattus norvegicus	46.08	1.00e-93	336.00
IUUC-Sit-110149	Setaria italica	57.02	0.00e+00	3475.00
IUUC-Sly-111285	Solanum lycopersicum	67.33	0.00e+00	4643.00
IUUC-Sbi-113794	Sorghum bicolor	54.15	0.00e+00	3301.00
IUUC-Tca-121646	Theobroma cacao	76.11	0.00e+00	5207.00
IUUC-Vvi-131559	Vitis vinifera	76.46	0.00e+00	2098.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence