iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ata-000545

Ensembl Protein ID

EMT16971

UniProt Accession

R7W6Q2; R7W6Q2_AEGTA

Genbank Protein ID

EMT16971.1

Protein Name

RING-H2 finger protein ATL1B

Genbank Nucleotide ID

KD536004

Gene Name

F775_06759

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
F775_06759	EMT16971	EMT16971

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.20e-08	35.2	90	132

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl +f   d+++vlp CgH fha C+  w         + +CP Cr
   Q: 90   CAICLAEFapGDEVRVLPtCGHGFHAACVDVW------LLSNSTCPSCR 132
           ********99566*******************......888889****8 PP

Organism

Aegilops tauschii

Protein Sequence
(Fasta)

MARGGTSVHT DTLLILAAVL CFLLCVLGLA MVARCSRLCN PSAFSVDAPG PVAAPCKGIK 60
KKALQALPTV SWRPQQSTEA DEEEGERAEC AICLAEFAPG DEVRVLPTCG HGFHAACVDV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCACGCG GCGGGACGAG CGTGCATACG GACACGCTGC TCATCCTGGC GGCCGTGCTC 60
TGCTTCCTGC TCTGCGTGCT CGGGCTGGCC ATGGTGGCCC GGTGCTCCCG CCTGTGCAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0472--Membrane
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

ats:F775_06759

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005933	Arabidopsis lyrata	58.54	6.00e-24	102.00
IUUC-Ath-007319	Arabidopsis thaliana	63.64	2.00e-26	110.00
IUUC-Bdi-014381	Brachypodium distachyon	73.68	8.00e-32	129.00
IUUC-Bol-015898	Brassica oleracea	49.56	8.00e-26	108.00
IUUC-Bra-017625	Brassica rapa	48.67	4.00e-25	106.00
IUUC-Gma-042991	Glycine max	53.66	3.00e-22	97.10
IUUC-Hvu-047055	Hordeum vulgare	92.19	4.00e-66	242.00
IUUC-Lpe-051329	Leersia perrieri	65.10	1.00e-32	132.00
IUUC-Mtr-057800	Medicago truncatula	49.57	2.00e-23	101.00
IUUC-Mac-064619	Musa acuminata	65.06	1.00e-25	108.00
IUUC-Oba-075557	Oryza barthii	73.33	3.00e-33	134.00
IUUC-Obr-076338	Oryza brachyantha	71.43	1.00e-40	158.00
IUUC-Ogl-077066	Oryza glaberrima	73.33	3.00e-33	134.00
IUUC-Ogu-078393	Oryza glumaepatula	73.33	3.00e-33	134.00
IUUC-Oin-079740	Oryza indica	73.33	3.00e-33	134.00
IUUC-Ome-081495	Oryza meridionalis	73.33	3.00e-33	134.00
IUUC-Oni-082487	Oryza nivara	73.33	3.00e-33	134.00
IUUC-Oru-084841	Oryza rufipogon	73.33	3.00e-33	134.00
IUUC-Osa-085975	Oryza sativa	73.33	3.00e-33	134.00
IUUC-Pop-099472	Populus trichocarpa	48.00	4.00e-24	103.00
IUUC-Ppe-101469	Prunus persica	50.60	1.00e-19	88.20
IUUC-Sit-110685	Setaria italica	68.70	2.00e-26	111.00
IUUC-Sly-110915	Solanum lycopersicum	48.63	7.00e-32	129.00
IUUC-Stu-112070	Solanum tuberosum	46.90	3.00e-31	127.00
IUUC-Sbi-114721	Sorghum bicolor	67.16	1.00e-28	118.00
IUUC-Tca-121004	Theobroma cacao	59.76	1.00e-25	108.00
IUUC-Tae-124309	Triticum aestivum	99.35	4.00e-56	209.00
IUUC-Tur-126504	Triticum urartu	91.50	1.00e-64	238.00
IUUC-Vvi-131638	Vitis vinifera	50.41	2.00e-24	104.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence