iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

   S: 1    CaiCledfkdg..plv.lpCgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl++f+d+  +++ + C H fh +C+  w         + +CP+Cr
   Q: 103  CAICLSEFSDEdtVRLiTVCRHPFHSNCIDLW------FELHKTCPVCR 145
           ********55444554388*************......999*******8 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MSSTTSIDSI PATAVFPSVS MPVTVVLTGV LLFVIFAGFF SLFLWQFLLN RLFTTWNLQR 60
TPYGDLIHVA TPPENTGLDP FIIRSFPVFH YSSATKKNHG TECAICLSEF SDEDTVRLIT 120

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Nucleotide Sequence
(Fasta)

GATTTTAACT GTCACAAAAG ACTCGCTCAA AATGGTAAGC AAAGCCACTT CTGTCTCTCA 60
GACATAGCCA CTTTATTCTC CTCATTTCTC TCTATTAACT TGAACAATAA TACTCCTTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0808--Transferase
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0016740--F:transferase activity
GO:0008270--F:zinc ion binding
GO:0016567--P:protein ubiquitination

KEGG

ath:AT2G35420

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005915	Arabidopsis lyrata	87.40	2.00e-119	420.00
IUUC-Bol-016098	Brassica oleracea	70.56	5.00e-86	311.00
IUUC-Bra-016965	Brassica rapa	72.41	9.00e-89	319.00
IUUC-Meu-056649	Macropus eugenii	29.84	8.00e-12	63.90
IUUC-Ogl-077109	Oryza glaberrima	45.16	1.00e-20	92.00
IUUC-Ogu-078731	Oryza glumaepatula	45.16	1.00e-20	92.00
IUUC-Olo-080350	Oryza longistaminata	44.09	8.00e-19	85.90
IUUC-Oni-082969	Oryza nivara	45.16	1.00e-20	92.00
IUUC-Oru-084314	Oryza rufipogon	45.16	1.00e-20	92.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence