iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114856

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000764

Gene Name

SORBI_005G226600

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb05g027490	Sb05g027490.1	Sb05g027490.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.80e-09	38.8	120	162

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl df+dg  ++vlp C H fha+C+  w       +++ +CP Cr
   Q: 120  CPVCLADFDDGeaVRVLPeCMHYFHAECIDTW------LRGSTSCPMCR 162
           ********88777*******************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MSLSWLTSSN AYKSPAFIAL VSALCVAVVL LLHQCVLVNC CHGGAAAADR DRRRRRQQHH 60
QRHVVGVVTT TTSTDARRRQ QDGNDDDVSV EVSATSRTHL VAAAVVCRYR KEEAWKETTC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCGCTGT CGTGGCTGAC GAGCAGCAAC GCGTACAAGT CGCCGGCGTT CATCGCGCTG 60
GTGAGCGCGC TGTGCGTGGC CGTGGTGCTG CTGCTGCACC AATGCGTCCT CGTCAACTGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_05g027490

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000386	Aegilops tauschii	52.29	7.00e-34	136.00
IUUC-Bdi-014545	Brachypodium distachyon	58.16	7.00e-22	95.50
IUUC-Lpe-050931	Leersia perrieri	65.00	6.00e-21	92.40
IUUC-Oba-075384	Oryza barthii	69.84	5.00e-24	104.00
IUUC-Obr-076661	Oryza brachyantha	65.79	6.00e-27	113.00
IUUC-Ogl-077754	Oryza glaberrima	64.89	5.00e-30	122.00
IUUC-Ogu-078516	Oryza glumaepatula	63.83	1.00e-29	121.00
IUUC-Oin-079675	Oryza indica	67.02	7.00e-30	122.00
IUUC-Olo-081036	Oryza longistaminata	64.89	6.00e-30	122.00
IUUC-Oni-082059	Oryza nivara	67.02	7.00e-30	122.00
IUUC-Opu-083960	Oryza punctata	70.97	9.00e-29	119.00
IUUC-Oru-084695	Oryza rufipogon	69.84	4.00e-24	104.00
IUUC-Sit-110243	Setaria italica	60.90	1.00e-34	138.00
IUUC-Tae-124876	Triticum aestivum	50.61	1.00e-36	144.00
IUUC-Tur-126058	Triticum urartu	86.27	5.00e-23	97.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence