iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114034

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000769

Gene Name

SORBI_010G156800

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb05g027550	Sb05g027550.1	Sb05g027550.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.40e-07	32.7	192	234

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C +Cl d++dg  ++vlp C H fha C+ kw       + +++CPlCr
   Q: 192  CGVCLADLDDGeaVRVLPaCMHYFHAACVGKW------LRVHATCPLCR 234
           99******88777*******************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MCHITLGHGS IGGNKDTILA TVVSPRHLQK ETTPMVSYLL STHNFMATNT NNGGGSHNHL 60
SSSSSTSLDG SPYRHMYFSR RQNSGQANDM DTNKLVPPIV FAVFAVIIWA VCSRVLRTDT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTGTCATA TCACCCTTGG CCATGGATCC ATCGGTGGCA ACAAAGACAC AATCCTCGCA 60
ACTGTCGTCA GCCCCAGACA CCTACAAAAG GAGACGACTC CCATGGTCTC GTACTTGTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_10g020970

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014323	Brachypodium distachyon	74.51	1.00e-19	88.20
IUUC-Lpe-051196	Leersia perrieri	58.82	5.00e-22	95.90
IUUC-Ogl-077269	Oryza glaberrima	63.93	1.00e-22	98.60
IUUC-Oin-080159	Oryza indica	63.93	1.00e-22	98.20
IUUC-Oni-082919	Oryza nivara	63.93	1.00e-22	98.20

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence