iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099618

Ensembl Protein ID

POPTR_0008s12930.1

UniProt Accession

B9HJB9; B9HJB9_POPTR

Genbank Protein ID

EEE89810.2

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000344

Gene Name

POPTRDRAFT_418974; POPTR_0008s12930g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0008s12930	POPTR_0008s12930.1	POPTR_0008s12930.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.10e-06	28.5	331	357

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtik 26
           H + vt+l f +d + lvs+s D + +
   Q: 331  HLGIVTALTFsHDsRALVSASMDSSAR 357
           8899******977799*******9866 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MGKKKGADPP ALQKYGVPLY SAAWLPLQFR HEDHDSSKQH EQDKDTEEMT HASASSYEYY 60
VILAGGGGEG RSGIPNAVLL SRFDFSSNSL SPQPVPKLNL GSDLPYRMVV HPGGDGLICA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCCTAACAG CTGGATCTGA TTCACAACCA TCGTTAACGA CACACTGTGA AGAAATTCCT 60
TCTATCGAAT TCCAATGGGA AAGAAGAAAG GGGCAGATCC TCCAGCCCTG CAAAAATACG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0677--Repeat
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0853--WD repeat

Interpro

IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0030176--C:integral component of endoplasmic reticulum membrane
GO:0005096--F:GTPase activator activity
GO:0051020--F:GTPase binding
GO:0005090--F:Sar guanyl-nucleotide exchange factor activity
GO:0009306--P:protein secretion
GO:0003400--P:regulation of COPII vesicle coating

KEGG

pop:POPTR_0008s12930g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001671	Ailuropoda melanoleuca	26.49	1.00e-16	80.10
IUUC-Aly-005479	Arabidopsis lyrata	53.37	5.00e-99	353.00
IUUC-Ath-007466	Arabidopsis thaliana	54.90	6.00e-99	353.00
IUUC-Bta-012386	Bos taurus	27.24	3.00e-19	89.00
IUUC-Bdi-014110	Brachypodium distachyon	50.00	7.00e-78	283.00
IUUC-Bra-016660	Brassica rapa	52.42	2.00e-96	345.00
IUUC-Cja-018998	Callithrix jacchus	29.17	2.00e-20	92.80
IUUC-Cfa-020666	Canis familiaris	27.78	9.00e-19	87.40
IUUC-Cpo-022030	Cavia porcellus	29.54	7.00e-19	87.80
IUUC-Csa-023521	Chlorocebus sabaeus	29.12	9.00e-21	94.00
IUUC-Cin-025431	Ciona intestinalis	24.80	3.00e-10	59.30
IUUC-Dre-027832	Danio rerio	26.75	3.00e-15	75.90
IUUC-Dno-028989	Dasypus novemcinctus	27.13	3.00e-19	89.00
IUUC-Dme-031901	Drosophila melanogaster	25.11	8.00e-14	71.20
IUUC-Ete-032290	Echinops telfairi	27.92	2.00e-16	79.70
IUUC-Eca-033917	Equus caballus	27.00	5.00e-19	88.20
IUUC-Fca-036323	Felis catus	26.72	3.00e-19	89.00
IUUC-Gmo-038693	Gadus morhua	24.79	1.00e-14	73.60
IUUC-Gga-040702	Gallus gallus	24.90	1.00e-13	70.90
IUUC-Gac-042635	Gasterosteus aculeatus	28.46	2.00e-12	66.60
IUUC-Gma-043946	Glycine max	60.37	9.00e-116	409.00
IUUC-Ggo-044648	Gorilla gorilla	28.68	8.00e-21	94.40
IUUC-Hsa-046003	Homo sapiens	28.57	7.00e-21	94.40
IUUC-Itr-048613	Ictidomys tridecemlineatus	27.73	1.00e-19	90.50
IUUC-Lch-049473	Latimeria chalumnae	24.89	4.00e-16	78.60
IUUC-Lpe-051586	Leersia perrieri	43.25	7.00e-82	296.00
IUUC-Loc-052177	Lepisosteus oculatus	23.81	3.00e-14	72.40
IUUC-Laf-054366	Loxodonta africana	27.48	2.00e-19	89.40
IUUC-Mcc-055775	Macaca mulatta	28.57	2.00e-21	96.30
IUUC-Mtr-058661	Medicago truncatula	60.11	2.00e-125	441.00
IUUC-Mvi-060443	Microbotryum violaceum	21.25	7.00e-11	61.60
IUUC-Mmr-061126	Microcebus murinus	29.06	4.00e-21	95.10
IUUC-Mdo-062928	Monodelphis domestica	25.40	1.00e-14	73.60
IUUC-Mmu-064083	Mus musculus	27.63	5.00e-20	91.70
IUUC-Mac-064955	Musa acuminata	50.12	8.00e-106	376.00
IUUC-Mpu-066857	Mustela putorius furo	27.10	4.00e-19	88.60
IUUC-Mlu-067891	Myotis lucifugus	27.52	8.00e-19	87.40
IUUC-Nle-070030	Nomascus leucogenys	28.29	2.00e-20	92.80
IUUC-Opr-070864	Ochotona princeps	29.66	3.00e-19	89.00
IUUC-Ont-072204	Oreochromis niloticus	26.46	6.00e-16	78.20
IUUC-Oan-073643	Ornithorhynchus anatinus	29.79	5.00e-15	74.30
IUUC-Ocu-074217	Oryctolagus cuniculus	29.24	9.00e-18	84.00
IUUC-Oba-075587	Oryza barthii	46.08	2.00e-80	291.00
IUUC-Obr-076826	Oryza brachyantha	44.72	3.00e-85	308.00
IUUC-Ogl-077927	Oryza glaberrima	47.25	8.00e-75	273.00
IUUC-Ogu-078241	Oryza glumaepatula	46.89	1.00e-74	272.00
IUUC-Oin-080217	Oryza indica	47.25	9.00e-75	273.00
IUUC-Olo-081060	Oryza longistaminata	45.87	6.00e-62	231.00
IUUC-Ome-082007	Oryza meridionalis	42.78	2.00e-81	295.00
IUUC-Oni-082827	Oryza nivara	47.25	9.00e-75	273.00
IUUC-Opu-083159	Oryza punctata	44.20	1.00e-83	303.00
IUUC-Oru-085039	Oryza rufipogon	47.25	9.00e-75	273.00
IUUC-Osa-086258	Oryza sativa	47.25	9.00e-75	273.00
IUUC-Ola-087223	Oryzias latipes	24.40	5.00e-15	75.10
IUUC-Oga-088417	Otolemur garnettii	26.74	2.00e-20	92.40
IUUC-Oar-090435	Ovis aries	27.61	1.00e-19	90.10
IUUC-Ptr-090869	Pan troglodytes	28.57	7.00e-15	74.30
IUUC-Pan-092527	Papio anubis	29.12	9.00e-21	94.00
IUUC-Pma-094156	Petromyzon marinus	29.15	5.00e-20	91.70
IUUC-Ppa-095614	Physcomitrella patens	36.90	6.00e-59	220.00
IUUC-Pfo-097488	Poecilia formosa	25.00	1.00e-11	63.50
IUUC-Pab-097720	Pongo abelii	28.96	2.00e-21	96.30
IUUC-Pca-100288	Procavia capensis	28.87	1.00e-16	80.50
IUUC-Ppe-101864	Prunus persica	60.87	4.00e-111	394.00
IUUC-Pva-103192	Pteropus vampyrus	28.75	6.00e-20	91.30
IUUC-Pgr-103489	Puccinia graminis	24.64	5.00e-10	58.20
IUUC-Ptt-103883	Puccinia triticina	21.55	5.00e-11	61.60
IUUC-Rno-106123	Rattus norvegicus	27.63	5.00e-20	91.70
IUUC-Sha-107169	Sarcophilus harrisii	25.00	2.00e-14	72.80
IUUC-Smo-109265	Selaginella moellendorffii	40.20	7.00e-53	200.00
IUUC-Sly-111551	Solanum lycopersicum	56.46	2.00e-100	358.00
IUUC-Stu-112264	Solanum tuberosum	56.08	9.00e-102	363.00
IUUC-Sar-113218	Sorex araneus	28.35	2.00e-15	75.10
IUUC-Sre-115183	Sporisorium reilianum	33.70	7.00e-11	61.20
IUUC-Ssc-115282	Sus scrofa	27.20	3.00e-18	85.90
IUUC-Tru-117866	Takifugu rubripes	25.65	3.00e-15	75.50
IUUC-Tca-121083	Theobroma cacao	62.53	7.00e-132	462.00
IUUC-Tae-124218	Triticum aestivum	50.73	4.00e-80	290.00
IUUC-Ttr-128585	Tursiops truncatus	26.34	6.00e-19	87.80
IUUC-Uma-129598	Ustilago maydis	34.69	4.00e-12	65.50
IUUC-Vvi-131024	Vitis vinifera	61.15	2.00e-134	471.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence