iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC
Protein-protein Interaction
HINT
Post-translational Modifications (PTMs)
dbPPT
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.20e-19	69.1	303	338

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 3    tdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           ++s++++af +d  +l++ ++Dg ++++D+ t++l+
   Q: 303  QGSINSIAFsNDgAHLATVGRDGYLRIFDFLTQKLV 338
           579*******9999***************9998876 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MMNTSNGMIS APSSSSSPAA NPQSPGIKTY FKTPEGKYKL HYEKTHSSGL LHYAHGKTVT 60
QVTIAQLKER AAPSTPTGTS SGYSASSGFR SATARLLGTG NGSRALSFVG GNGGGKSVST 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTAAAAGCT TCCGAGTCAA AGCTTTGATA ATCATAATAT GTTGCGAGAA ACAAGTAGTT 60
GCATCATAAT AACCCCTTTT GATTCGGTAA GCCATTAGAG ACCTCAGAAG AAGAGAAGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0016579--P:protein deubiquitination

KEGG

ath:AT3G53390

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000844	Aegilops tauschii	58.15	7.00e-118	416.00
IUUC-Atr-002459	Amborella trichopoda	72.53	0.00e+00	714.00
IUUC-Aly-005705	Arabidopsis lyrata	98.03	0.00e+00	1009.00
IUUC-Acl-008348	Aspergillus clavatus	39.07	5.00e-55	207.00
IUUC-Afl-008642	Aspergillus flavus	34.79	4.00e-59	221.00
IUUC-Afu-008994	Aspergillus fumigatus	34.00	1.00e-53	203.00
IUUC-Ani-009266	Aspergillus nidulans	29.93	3.00e-59	222.00
IUUC-Ang-009614	Aspergillus niger	35.44	7.00e-60	224.00
IUUC-Aor-010159	Aspergillus oryzae	34.79	4.00e-59	221.00
IUUC-Ate-010476	Aspergillus terreus	34.15	3.00e-59	222.00
IUUC-Bci-013753	Botrytis cinerea	31.44	2.00e-55	209.00
IUUC-Bdi-014307	Brachypodium distachyon	64.19	0.00e+00	664.00
IUUC-Bol-015990	Brassica oleracea	92.86	0.00e+00	953.00
IUUC-Bra-017842	Brassica rapa	76.84	0.00e+00	798.00
IUUC-Cgl-026394	Colletotrichum gloeosporioides	32.23	6.00e-58	218.00
IUUC-Dse-031362	Dothistroma septosporum	32.46	3.00e-60	225.00
IUUC-Dme-031790	Drosophila melanogaster	31.03	1.00e-45	177.00
IUUC-Fox-037668	Fusarium oxysporum	31.51	2.00e-15	76.60
IUUC-Fso-038140	Fusarium solani	32.43	1.00e-59	223.00
IUUC-Ggr-039757	Gaeumannomyces graminis	30.77	5.00e-58	218.00
IUUC-Gma-043670	Glycine max	78.07	0.00e+00	803.00
IUUC-Hvu-047057	Hordeum vulgare	60.06	6.00e-102	363.00
IUUC-Lpe-051378	Leersia perrieri	68.81	0.00e+00	680.00
IUUC-Lma-053071	Leptosphaeria maculans	35.39	2.00e-50	193.00
IUUC-Mor-057249	Magnaporthe oryzae	31.90	5.00e-56	211.00
IUUC-Mpo-057472	Magnaporthe poae	29.50	1.00e-57	216.00
IUUC-Mtr-058649	Medicago truncatula	73.28	0.00e+00	749.00
IUUC-Mvi-060521	Microbotryum violaceum	29.47	9.00e-38	151.00
IUUC-Mac-064899	Musa acuminata	68.45	0.00e+00	696.00
IUUC-Nfi-068256	Neosartorya fischeri	33.98	1.00e-60	226.00
IUUC-Ncr-068904	Neurospora crassa	31.52	2.00e-56	213.00
IUUC-Oba-075876	Oryza barthii	60.82	0.00e+00	626.00
IUUC-Obr-076346	Oryza brachyantha	64.98	0.00e+00	671.00
IUUC-Ogl-077048	Oryza glaberrima	64.94	0.00e+00	684.00
IUUC-Ogu-078225	Oryza glumaepatula	63.07	0.00e+00	662.00
IUUC-Oin-079605	Oryza indica	64.94	0.00e+00	684.00
IUUC-Olo-080349	Oryza longistaminata	48.57	3.00e-80	290.00
IUUC-Oni-082472	Oryza nivara	63.07	0.00e+00	663.00
IUUC-Opu-083440	Oryza punctata	62.10	0.00e+00	668.00
IUUC-Oru-084205	Oryza rufipogon	60.82	1.00e-180	625.00
IUUC-Osa-086186	Oryza sativa	64.94	0.00e+00	684.00
IUUC-Olu-087793	Ostreococcus lucimarinus	32.50	2.00e-40	158.00
IUUC-Ppa-095812	Physcomitrella patens	58.38	3.00e-172	597.00
IUUC-Pop-099670	Populus trichocarpa	76.79	0.00e+00	796.00
IUUC-Ppe-101762	Prunus persica	74.08	0.00e+00	783.00
IUUC-Pte-104091	Pyrenophora teres	29.31	3.00e-57	216.00
IUUC-Pyt-104509	Pyrenophora triticirepentis	31.08	7.00e-58	217.00
IUUC-Sja-107886	Schizosaccharomyces japonicus	31.01	3.00e-44	172.00
IUUC-Spo-108343	Schizosaccharomyces pombe	31.40	2.00e-45	176.00
IUUC-Ssl-108563	Sclerotinia sclerotiorum	34.50	6.00e-46	177.00
IUUC-Smo-108850	Selaginella moellendorffii	61.22	0.00e+00	637.00
IUUC-Sit-110829	Setaria italica	66.42	0.00e+00	695.00
IUUC-Sly-111266	Solanum lycopersicum	73.30	0.00e+00	766.00
IUUC-Stu-112818	Solanum tuberosum	75.40	0.00e+00	756.00
IUUC-Sbi-113976	Sorghum bicolor	66.34	0.00e+00	651.00
IUUC-Sre-115177	Sporisorium reilianum	32.58	4.00e-33	135.00
IUUC-Tca-121339	Theobroma cacao	79.17	0.00e+00	831.00
IUUC-Tre-122206	Trichoderma reesei	32.17	4.00e-52	198.00
IUUC-Tvi-122377	Trichoderma virens	32.87	4.00e-54	205.00
IUUC-Tae-125451	Triticum aestivum	64.19	0.00e+00	673.00
IUUC-Tur-126428	Triticum urartu	56.16	1.00e-114	405.00
IUUC-Uma-129485	Ustilago maydis	42.21	8.00e-33	135.00
IUUC-Vda-129875	Verticillium dahliae	32.96	2.00e-62	232.00
IUUC-Vvi-130973	Vitis vinifera	73.70	0.00e+00	811.00
IUUC-Zma-135897	Zea mays	67.07	0.00e+00	668.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence