iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-113850

Ensembl Protein ID

Sb10g027480.1

UniProt Accession

C5Z862; C5Z862_SORBI

Genbank Protein ID

EER90232.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000769

Gene Name

SORBI_010G232300

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb10g027480	Sb10g027480.1	Sb10g027480.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UBQ/UBQ_Other	2.40e-20	73.0	1	81

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UBQ/UBQ_Other

   S: 1    vqvtvksldgseltlkvnpsdtVaeLKekiekklgippeqqrLiykGki...........LeddktLadyglkdgstihll 70
           + vt+ ++ g+e+t++v+  +tV e+Ke ++ ++gip+++qrL ++G++           L+d ++ a+yg+ +gs ++l+
   Q: 1    MDVTFATPGGREFTVEVWYFATVREMKEAVHAREGIPVASQRLFLAGREgkaaeeddqqeLDDARDTAHYGIVEGSRVVLV 81
           56899999**************************************777777888887779****************9998 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MDVTFATPGG REFTVEVWYF ATVREMKEAV HAREGIPVAS QRLFLAGREG KAAEEDDQQE 60
LDDARDTAHY GIVEGSRVVL VLPDDAPPPS PSPSPSPSPS PANANAAVVR VAVSAPEIIG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGAGCGCGAT CGACGGAGAT GGACGTGACG TTCGCGACGC CGGGGGGACG GGAGTTCACC 60
GTCGAGGTGT GGTACTTCGC GACGGTGCGG GAGATGAAGG AGGCGGTCCA CGCGCGCGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom

PROSITE

PS50053--UBIQUITIN_2

Pfam

PF00240--ubiquitin

SMART

SM00213--UBQ

KEGG

sbi:SORBI_10g027480

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001136	Aegilops tauschii	50.51	1.00e-62	232.00
IUUC-Gma-043557	Glycine max	34.92	1.00e-34	138.00
IUUC-Hvu-047481	Hordeum vulgare	48.49	4.00e-61	226.00
IUUC-Mtr-057824	Medicago truncatula	29.35	6.00e-30	123.00
IUUC-Oba-075216	Oryza barthii	52.44	9.00e-18	81.60
IUUC-Obr-076204	Oryza brachyantha	72.55	5.00e-18	83.60
IUUC-Ogl-077464	Oryza glaberrima	44.94	5.00e-50	190.00
IUUC-Ogu-078789	Oryza glumaepatula	43.35	1.00e-49	188.00
IUUC-Oin-079834	Oryza indica	46.31	7.00e-49	186.00
IUUC-Ome-081807	Oryza meridionalis	42.49	4.00e-46	177.00
IUUC-Oni-082949	Oryza nivara	43.63	1.00e-50	192.00
IUUC-Opu-083919	Oryza punctata	45.94	3.00e-53	201.00
IUUC-Oru-084806	Oryza rufipogon	43.59	8.00e-50	189.00
IUUC-Pop-099086	Populus trichocarpa	31.74	6.00e-29	120.00
IUUC-Ppe-101213	Prunus persica	34.33	1.00e-31	129.00
IUUC-Sit-109925	Setaria italica	67.79	6.00e-84	303.00
IUUC-Sly-110909	Solanum lycopersicum	30.72	5.00e-25	107.00
IUUC-Tca-121426	Theobroma cacao	34.81	3.00e-31	127.00
IUUC-Tae-124982	Triticum aestivum	50.17	8.00e-66	242.00
IUUC-Tur-126620	Triticum urartu	46.91	5.00e-33	133.00
IUUC-Vvi-131330	Vitis vinifera	39.16	1.00e-23	102.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence