iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Gma-044032

Ensembl Protein ID

GLYMA12G01040.1

UniProt Accession

I1LNW1; I1LNW1_SOYBN

Genbank Protein ID

KRH23872.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000845

Gene Name

LOC100815407; GLYMA_12G007900

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA12G01040	GLYMA12G01040.1	GLYMA12G01040.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	3.50e-13	51.1	273	330

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedek..slveCekCrewfHpaClkls....veeelpnsekwiCpkCrs 53
           ++C+vC + ++d++   +v+C+ C+ w+H +C ++s     + ++ ++ ++ Cp Cr 
   Q: 273  NYCPVCLKVYRDSEstPMVCCDTCQLWVHCQCDNISeekyHQFQVDGNLQYKCPTCRG 330
           79*********998888999999*************55433334445555******85 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MAFHVACPIT CRRICFCTLG FPRALHASPD APNAFVHDVS ALRDFLADTR RDDATVQVLV 60
PKVLPPLPPP SDAVPLGPDA LDESASMKAK RIALQRKGAA AMIAAEEYAR RFESGDVVNT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGCATCTCTT TCTTTCGATT TCGATTTCGA TTTCCTCCTT CCTCTTCTCA GCAAGCGACG 60
CCTAGTTACA GCACTCCCCT CTCAATCCTA CTACTACCCC CCTTTTATTA TTTCTTTTAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR015967--Rcmb_RecR_CS
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS01300--RECR
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

SMART

SM00249--PHD
SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding
GO:0006310--P:DNA recombination
GO:0006281--P:DNA repair

KEGG

gmx:100815407

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006363	Arabidopsis lyrata	50.75	0.00e+00	743.00
IUUC-Ath-007307	Arabidopsis thaliana	50.64	0.00e+00	745.00
IUUC-Bdi-014882	Brachypodium distachyon	41.67	5.00e-138	484.00
IUUC-Bol-015791	Brassica oleracea	50.18	0.00e+00	716.00
IUUC-Bra-017422	Brassica rapa	49.36	0.00e+00	710.00
IUUC-Cin-025528	Ciona intestinalis	31.78	1.00e-11	63.90
IUUC-Mtr-058482	Medicago truncatula	71.87	0.00e+00	1093.00
IUUC-Ogl-077851	Oryza glaberrima	41.69	3.00e-141	495.00
IUUC-Ogu-078706	Oryza glumaepatula	41.63	1.00e-134	473.00
IUUC-Oin-079802	Oryza indica	60.14	5.00e-104	372.00
IUUC-Olo-080932	Oryza longistaminata	41.63	3.00e-134	472.00
IUUC-Ome-081954	Oryza meridionalis	34.46	1.00e-89	324.00
IUUC-Oni-082043	Oryza nivara	41.63	4.00e-134	472.00
IUUC-Oru-084257	Oryza rufipogon	41.63	5.00e-134	472.00
IUUC-Osa-085421	Oryza sativa	41.69	2.00e-134	473.00
IUUC-Ppa-095221	Physcomitrella patens	44.12	4.00e-104	372.00
IUUC-Sit-110552	Setaria italica	42.90	1.00e-149	523.00
IUUC-Tca-121624	Theobroma cacao	59.84	0.00e+00	885.00
IUUC-Tae-124647	Triticum aestivum	45.12	3.00e-107	382.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence