iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017408

Ensembl Protein ID

Bra001390.1-P

UniProt Accession

M4CB11; M4CB11_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra001390	Bra001390.1	Bra001390.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.60e-06	28.8	105	147

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl  +++g   +vlp C H++h +C+ +w       ++e +CPlCr
   Q: 105  CCICLGGLEEGekMKVLPmCRHCYHCECVDRW------LMTESSCPLCR 147
           ********6555599999**************......**********8 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MTSSSPPPRD SMLLYWQENQ YDDRNVQIHG RTIFSVMALF SVVLFFAVLT LYIHRSCLVR 60
DPTSLNPPSP PFTSYVGGGL DPAEIRSLPV VLCRREAAEE EMEECCICLG GLEEGEKMKV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACGTCAT CATCACCGCC TCCAAGAGAT TCAATGCTTT TGTACTGGCA GGAGAACCAA 60
TACGACGACC GGAACGTCCA GATTCACGGC CGGACAATCT TCTCCGTCAT GGCTCTATTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006564	Arabidopsis lyrata	74.21	7.00e-61	225.00
IUUC-Gma-043125	Glycine max	44.44	3.00e-31	127.00
IUUC-Mtr-058498	Medicago truncatula	42.68	1.00e-22	99.00
IUUC-Oba-075191	Oryza barthii	32.91	1.00e-13	68.90
IUUC-Ogl-077584	Oryza glaberrima	32.91	1.00e-13	68.90
IUUC-Ogu-078773	Oryza glumaepatula	32.91	1.00e-13	68.90
IUUC-Oin-080112	Oryza indica	33.76	4.00e-14	70.50
IUUC-Olo-080647	Oryza longistaminata	34.46	2.00e-12	64.70
IUUC-Oni-082108	Oryza nivara	33.76	5.00e-14	70.50
IUUC-Opu-083607	Oryza punctata	36.26	9.00e-19	86.30
IUUC-Oru-084593	Oryza rufipogon	32.91	1.00e-13	68.90
IUUC-Osa-086279	Oryza sativa	32.91	1.00e-13	68.90
IUUC-Pop-099417	Populus trichocarpa	40.16	2.00e-21	94.00
IUUC-Ppe-101926	Prunus persica	37.18	1.00e-18	85.10
IUUC-Sit-110425	Setaria italica	37.28	3.00e-21	94.40
IUUC-Sly-110981	Solanum lycopersicum	34.67	2.00e-19	88.20
IUUC-Stu-112860	Solanum tuberosum	38.93	1.00e-23	101.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence