iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Obr-076068

Ensembl Protein ID

OB01G49440.1

UniProt Accession

J3L6T8; J3L6T8_ORYBR

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OB01G49440	OB01G49440.1	OB01G49440.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	5.80e-32	110.3	293	364

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           +pee++CpIsl+lM dPv+++sG+ty+r +Iekw+++g++tcP+t+q+l++ +l+Pn+ +++li +wce+n+
   Q: 293  PPEELRCPISLQLMYDPVIISSGQTYERVCIEKWFNDGHSTCPKTQQQLAHLSLTPNYCVKALIASWCEQND 364
           59********************************************************************97 PP

Organism

Oryza brachyantha

Protein Sequence
(Fasta)

MDAMEADEGP LLAIDAKLHA GMCRAFQPAV SKLLVIFPDI EASRPRSKSG IQALCSLHVA 60
LDKAKGLLQH CADCSRLYLA ITAETVLLKF EKARSQLQES LRRVEGIVTE EIGCKIVEIV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTTGGAGC TCTGGTGGTA GTTTAATAAT GGATGCAATG GAGGCTGATG AAGGTCCTTT 60
ACTGGCTATC GATGCCAAGG TATCATCCTG ACAGTGCTTT AATCTTGATG GCAACTAGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

obr:102712869

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000843	Aegilops tauschii	84.23	0.00e+00	1305.00
IUUC-Atr-002816	Amborella trichopoda	52.40	0.00e+00	694.00
IUUC-Aly-005662	Arabidopsis lyrata	54.65	0.00e+00	783.00
IUUC-Ath-006967	Arabidopsis thaliana	54.19	0.00e+00	780.00
IUUC-Bdi-014509	Brachypodium distachyon	84.93	0.00e+00	1283.00
IUUC-Bol-015443	Brassica oleracea	54.81	0.00e+00	792.00
IUUC-Bra-017502	Brassica rapa	52.69	0.00e+00	796.00
IUUC-Gma-043476	Glycine max	56.43	0.00e+00	816.00
IUUC-Hvu-047761	Hordeum vulgare	84.40	0.00e+00	1255.00
IUUC-Lpe-051154	Leersia perrieri	94.86	0.00e+00	1404.00
IUUC-Mtr-058026	Medicago truncatula	56.82	0.00e+00	788.00
IUUC-Mac-064644	Musa acuminata	50.19	0.00e+00	676.00
IUUC-Oba-075037	Oryza barthii	94.98	0.00e+00	1483.00
IUUC-Ogl-077029	Oryza glaberrima	94.98	0.00e+00	1483.00
IUUC-Ogu-078230	Oryza glumaepatula	94.97	0.00e+00	1481.00
IUUC-Oin-079566	Oryza indica	94.86	0.00e+00	1481.00
IUUC-Olo-080879	Oryza longistaminata	91.79	0.00e+00	1353.00
IUUC-Ome-081577	Oryza meridionalis	94.86	0.00e+00	1480.00
IUUC-Oni-082610	Oryza nivara	94.60	0.00e+00	1474.00
IUUC-Opu-083186	Oryza punctata	95.60	0.00e+00	1489.00
IUUC-Oru-084375	Oryza rufipogon	94.49	0.00e+00	1446.00
IUUC-Osa-085376	Oryza sativa	94.62	0.00e+00	1446.00
IUUC-Ppa-095879	Physcomitrella patens	35.29	2.00e-118	419.00
IUUC-Pop-100088	Populus trichocarpa	55.79	0.00e+00	856.00
IUUC-Ppe-101913	Prunus persica	56.30	0.00e+00	865.00
IUUC-Sit-109865	Setaria italica	87.08	0.00e+00	1377.00
IUUC-Sly-110840	Solanum lycopersicum	54.05	0.00e+00	771.00
IUUC-Stu-112347	Solanum tuberosum	53.88	0.00e+00	764.00
IUUC-Sbi-114310	Sorghum bicolor	86.91	0.00e+00	1345.00
IUUC-Tca-121734	Theobroma cacao	57.76	0.00e+00	871.00
IUUC-Tae-123152	Triticum aestivum	86.09	0.00e+00	1307.00
IUUC-Tur-126692	Triticum urartu	80.22	0.00e+00	1129.00
IUUC-Vvi-131273	Vitis vinifera	56.89	0.00e+00	875.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence