iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Olo-080227

Ensembl Protein ID

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
KN538778.1_FG005	KN538778.1_FGT005	KN538778.1_FGP005

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.00e-06	29.7	132	173

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+C+e+f     + + +pC H++h++C+  w         + +CP+Cr
   Q: 132  CAVCKEPFdlgA-EAREMPCAHIYHHHCILPW------LALHNSCPVCR 173
           ********7743.4899***************......**********8 PP

Organism

Oryza longistaminata

Protein Sequence
(Fasta)

MDDDASSYTY WCHSCDRFVH PHPHLDAAVL CPHCNAAGFL HDHEMPPAAD HSPFNPVIVL 60
RRSASPDDAT TFDLLYDDGA ASASAFRPLF DRLLLRIPSA SDNPNPPASK AAVDSMPTIL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACGACG ACGCCTCCTC CTACACCTAC TGGTGCCACA GCTGCGACCG CTTCGTCCAC 60
CCCCACCCCC ACCTCGACGC CGCTGTGCTC TGTCCCCACT GCAACGCCGC TGGCTTCCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003131	Amborella trichopoda	42.42	3.00e-46	178.00
IUUC-Aly-006461	Arabidopsis lyrata	40.06	3.00e-50	191.00
IUUC-Ath-007507	Arabidopsis thaliana	39.49	1.00e-51	196.00
IUUC-Bdi-014752	Brachypodium distachyon	43.14	2.00e-58	218.00
IUUC-Bol-016362	Brassica oleracea	40.60	1.00e-51	195.00
IUUC-Bra-016900	Brassica rapa	40.29	5.00e-39	154.00
IUUC-Gma-043110	Glycine max	44.26	3.00e-49	188.00
IUUC-Hvu-047236	Hordeum vulgare	54.90	1.00e-52	198.00
IUUC-Lpe-051386	Leersia perrieri	48.57	4.00e-68	251.00
IUUC-Mtr-057892	Medicago truncatula	41.84	4.00e-50	191.00
IUUC-Mac-065318	Musa acuminata	44.48	1.00e-52	199.00
IUUC-Oba-075442	Oryza barthii	92.86	1.00e-122	431.00
IUUC-Obr-076496	Oryza brachyantha	54.76	5.00e-54	202.00
IUUC-Ogl-077848	Oryza glaberrima	92.86	1.00e-122	431.00
IUUC-Ogu-078558	Oryza glumaepatula	93.75	2.00e-124	437.00
IUUC-Oin-079130	Oryza indica	93.15	1.00e-128	451.00
IUUC-Ome-081117	Oryza meridionalis	86.31	1.00e-104	372.00
IUUC-Oni-082454	Oryza nivara	93.15	3.00e-127	447.00
IUUC-Opu-083490	Oryza punctata	53.57	2.00e-52	197.00
IUUC-Oru-084818	Oryza rufipogon	92.84	7.00e-124	436.00
IUUC-Osa-085697	Oryza sativa	92.56	2.00e-123	434.00
IUUC-Pop-099309	Populus trichocarpa	44.64	2.00e-58	218.00
IUUC-Ppe-101788	Prunus persica	41.19	4.00e-47	181.00
IUUC-Sly-110949	Solanum lycopersicum	41.21	2.00e-49	188.00
IUUC-Stu-112595	Solanum tuberosum	43.14	5.00e-49	187.00
IUUC-Sbi-114707	Sorghum bicolor	51.88	2.00e-44	172.00
IUUC-Tca-121148	Theobroma cacao	40.97	3.00e-47	181.00
IUUC-Tae-124475	Triticum aestivum	45.24	1.00e-63	236.00
IUUC-Vvi-131530	Vitis vinifera	42.30	3.00e-46	179.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence