iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014627

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000882

Gene Name

LOC100825125; BRADI_3g45200

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI3G45200	BRADI3G45200.1	BRADI3G45200.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.10e-31	109.3	9	92

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwl...asggk......tcPvtrqpl.teedl...vPnltlrrliqawceenss 74
           +vp++flCpIsle+MrdPv+l++Gitydr sIe+wl   a          tcPvtrq+l t ++l   +Pn+tlrrliqawc+ +++
   Q: 9    DVPPYFLCPISLEIMRDPVTLATGITYDRGSIERWLfdkA---AggqghaTCPVTRQKLaTADELveaTPNHTLRRLIQAWCAMHAV 92
           69**********************************6552...4444677*********8666655568*************99876 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MEDSSVQVDV PPYFLCPISL EIMRDPVTLA TGITYDRGSI ERWLFDKAAG GQGHATCPVT 60
RQKLATADEL VEATPNHTLR RLIQAWCAMH AVERFPTPRP PVDACRVAAL VDEGRHQELA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCTAGCTGCC TTCGCTCGCA ATCGCTTGCT AGATCCCTCA GCTAGCTCCT AAAAGTAAAG 60
CAATGGAGGA TTCGTCGGTG CAGGTGGATG TGCCGCCCTA CTTCCTGTGC CCGATCTCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

bdi:100825125

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000639	Aegilops tauschii	74.19	1.00e-154	538.00
IUUC-Atr-002430	Amborella trichopoda	43.69	2.00e-87	315.00
IUUC-Aly-006194	Arabidopsis lyrata	43.65	7.00e-95	340.00
IUUC-Ath-007471	Arabidopsis thaliana	43.98	2.00e-96	344.00
IUUC-Bol-015755	Brassica oleracea	44.47	1.00e-99	355.00
IUUC-Bra-016841	Brassica rapa	44.47	3.00e-101	360.00
IUUC-Gma-043521	Glycine max	46.74	8.00e-106	376.00
IUUC-Hvu-047293	Hordeum vulgare	76.74	1.00e-152	531.00
IUUC-Lpe-051695	Leersia perrieri	62.33	8.00e-113	399.00
IUUC-Mtr-058052	Medicago truncatula	45.14	3.00e-109	387.00
IUUC-Mac-064692	Musa acuminata	46.01	1.00e-94	339.00
IUUC-Oba-075115	Oryza barthii	65.41	3.00e-70	258.00
IUUC-Ogu-079030	Oryza glumaepatula	67.19	9.00e-124	436.00
IUUC-Oin-079734	Oryza indica	67.95	1.00e-123	435.00
IUUC-Ome-081360	Oryza meridionalis	66.29	1.00e-118	419.00
IUUC-Oni-082818	Oryza nivara	69.64	1.00e-124	439.00
IUUC-Opu-083355	Oryza punctata	68.56	1.00e-131	462.00
IUUC-Oru-085239	Oryza rufipogon	67.19	9.00e-124	436.00
IUUC-Osa-086041	Oryza sativa	67.19	9.00e-124	436.00
IUUC-Pop-099941	Populus trichocarpa	49.42	3.00e-118	417.00
IUUC-Ppe-102059	Prunus persica	44.08	7.00e-106	376.00
IUUC-Sit-110734	Setaria italica	75.76	1.00e-148	518.00
IUUC-Sly-111579	Solanum lycopersicum	44.26	4.00e-98	350.00
IUUC-Stu-112238	Solanum tuberosum	43.93	2.00e-109	387.00
IUUC-Sbi-114657	Sorghum bicolor	71.83	3.00e-146	510.00
IUUC-Tca-121107	Theobroma cacao	48.13	8.00e-113	399.00
IUUC-Tae-124641	Triticum aestivum	77.31	9.00e-163	565.00
IUUC-Tur-125965	Triticum urartu	71.59	5.00e-151	526.00
IUUC-Vvi-131012	Vitis vinifera	47.10	2.00e-110	391.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence