iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sit-110734

Ensembl Protein ID

Si017274m

UniProt Accession

K3YSM9; K3YSM9_SETIT

Genbank Protein ID

KQL29932.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM003528

Gene Name

LOC101760042; SETIT_017274mg

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Si017274m.g	Si017274m	Si017274m

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	4.70e-34	117.2	13	89

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwl.asggktcPvtrqpl..teedlvPnltlrrliqawceenss 74
           evp++flCpIsle+MrdPv+l++Gitydr+sIe+wl  +g+ tcPvtr+ l  +e d +Pn+tlrrliqawc+++++
   Q: 13   EVPHYFLCPISLEVMRDPVTLATGITYDRASIERWLfTDGHATCPVTRRALapEEMDATPNHTLRRLIQAWCAAHQV 89
           69**********************************555666*********6556666****************997 PP

Organism

Setaria italica

Protein Sequence
(Fasta)

MEVSSSSSAA AAEVPHYFLC PISLEVMRDP VTLATGITYD RASIERWLFT DGHATCPVTR 60
RALAPEEMDA TPNHTLRRLI QAWCAAHQVE RFPTPRPPLD SCRVAALLDE GRHGREAAAL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGGTCT CGTCGTCGTC TTCGGCGGCG GCCGCGGAGG TGCCGCACTA CTTCCTCTGC 60
CCGATCTCGC TGGAGGTCAT GCGAGACCCG GTGACGCTCG CCACCGGCAT CACCTACGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

sita:101760042

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000639	Aegilops tauschii	76.37	1.00e-147	515.00
IUUC-Ath-007471	Arabidopsis thaliana	44.37	5.00e-92	330.00
IUUC-Bdi-014627	Brachypodium distachyon	76.00	1.00e-154	538.00
IUUC-Bol-015299	Brassica oleracea	45.07	1.00e-97	348.00
IUUC-Bra-016841	Brassica rapa	45.31	4.00e-98	350.00
IUUC-Gma-043521	Glycine max	47.64	4.00e-104	370.00
IUUC-Hvu-047293	Hordeum vulgare	77.70	1.00e-147	515.00
IUUC-Lpe-051695	Leersia perrieri	64.81	3.00e-115	407.00
IUUC-Mtr-058052	Medicago truncatula	47.29	1.00e-107	382.00
IUUC-Mac-064692	Musa acuminata	47.38	1.00e-97	348.00
IUUC-Oba-075115	Oryza barthii	62.83	8.00e-78	283.00
IUUC-Ogu-079030	Oryza glumaepatula	71.95	5.00e-130	456.00
IUUC-Oin-079734	Oryza indica	71.95	4.00e-130	457.00
IUUC-Ome-081360	Oryza meridionalis	70.20	2.00e-127	448.00
IUUC-Oni-082818	Oryza nivara	71.26	1.00e-131	462.00
IUUC-Opu-083355	Oryza punctata	71.76	8.00e-138	483.00
IUUC-Oru-085239	Oryza rufipogon	71.95	4.00e-130	457.00
IUUC-Osa-086041	Oryza sativa	71.95	5.00e-130	456.00
IUUC-Pop-099765	Populus trichocarpa	48.22	4.00e-112	397.00
IUUC-Ppe-102059	Prunus persica	45.86	3.00e-106	377.00
IUUC-Sly-111579	Solanum lycopersicum	46.32	5.00e-96	343.00
IUUC-Stu-112238	Solanum tuberosum	45.84	6.00e-107	380.00
IUUC-Sbi-114657	Sorghum bicolor	84.49	8.00e-178	615.00
IUUC-Tca-121107	Theobroma cacao	47.62	1.00e-107	382.00
IUUC-Tae-124641	Triticum aestivum	76.90	9.00e-150	522.00
IUUC-Tur-125965	Triticum urartu	71.02	6.00e-144	503.00
IUUC-Vvi-131173	Vitis vinifera	48.10	1.00e-107	382.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence