iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-015298

Ensembl Protein ID

Bo5g117170.1

UniProt Accession

A0A0D3CIS0; A0A0D3CIS0_BRAOL

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo5g117170	Bo5g117170.1	Bo5g117170.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.40e-29	102.7	12	84

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           vp +f+CpIsl++Mr Pv l++G+tydr sI++wl+ g++tcP t+q l+++d+vPnltl+rli+aw ++ +s
   Q: 12   VPTFFKCPISLDVMRSPVSLCTGVTYDRPSIQRWLDGGNNTCPATMQILKSKDFVPNLTLQRLIKAWSDSVGS 84
           89*****************************************************************998765 PP

Organism

Brassica oleracea

Protein Sequence
(Fasta)

MGRDETETYI TVPTFFKCPI SLDVMRSPVS LCTGVTYDRP SIQRWLDGGN NTCPATMQIL 60
KSKDFVPNLT LQRLIKAWSD SVGSSAAASP DPASARGIPT KEEVNESLMR LSQEKDDEIR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGGAGAG ATGAAACCGA GACGTACATT ACGGTGCCTA CCTTCTTCAA GTGTCCGATA 60
TCTCTCGACG TGATGAGATC TCCCGTTAGT CTCTGCACCG GCGTCACCTA CGATCGTCCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bra-017611	Brassica rapa	92.45	0.00e+00	743.00
IUUC-Lpe-050910	Leersia perrieri	75.36	1.00e-29	123.00
IUUC-Mac-064892	Musa acuminata	69.51	3.00e-30	125.00
IUUC-Obr-076848	Oryza brachyantha	78.26	3.00e-30	125.00
IUUC-Ogl-077051	Oryza glaberrima	77.78	3.00e-27	115.00
IUUC-Olo-080339	Oryza longistaminata	80.95	8.00e-28	116.00
IUUC-Opu-083818	Oryza punctata	78.26	2.00e-30	126.00
IUUC-Oru-085038	Oryza rufipogon	78.26	2.00e-30	126.00
IUUC-Osa-086178	Oryza sativa	78.26	2.00e-30	126.00
IUUC-Ptt-103749	Puccinia triticina	32.61	6.30e-01	29.60

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence