iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-114652

Ensembl Protein ID

Sb04g025000.1

UniProt Accession

C5XX41; C5XX41_SORBI

Genbank Protein ID

EES05371.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000763

Gene Name

SORBI_004G203700

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb04g025000	Sb04g025000.1	Sb04g025000.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UBQ/UBQ_Other	6.50e-11	42.8	65	135

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UBQ/UBQ_Other

   S: 3    vtvksldgs.eltlkvnpsdtVaeLKekiekklgippeqqrLiykGkiLeddktLadyglkdgstihllek 72
           vtv+ ++g   +++++  ++t++eLK ++++ +g+ p++qrL+++Gk+ +d + L  +g++d ++++lle+
   Q: 65   VTVRVSTGFsWHDVSIAATSTFGELKVMLSMITGLEPREQRLLFRGKERDDTDHLHMVGVRDKDKVLLLED 135
           89*******99*********************************************************987 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MIKLGYSKRL FKRSTSSSKQ QQQQAAACGG GDNGVGGGAG EIEWEVRPGG MLVQKRNGRG 60
GQEMVTVRVS TGFSWHDVSI AATSTFGELK VMLSMITGLE PREQRLLFRG KERDDTDHLH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATCAAGC TGGGGTACTC CAAGAGGCTG TTCAAGAGAA GCACCTCCTC GTCCAAGCAG 60
CAGCAGCAGC AGGCGGCCGC TTGTGGCGGC GGCGACAATG GCGTCGGTGG CGGCGCCGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom

PROSITE

PS50053--UBIQUITIN_2

Pfam

PF00240--ubiquitin

KEGG

sbi:SORBI_04g025000

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006310	Arabidopsis lyrata	63.87	9.00e-40	154.00
IUUC-Ath-006877	Arabidopsis thaliana	51.27	8.00e-39	151.00
IUUC-Bdi-014241	Brachypodium distachyon	70.48	8.00e-57	211.00
IUUC-Bol-016423	Brassica oleracea	61.34	1.00e-38	151.00
IUUC-Bra-016901	Brassica rapa	61.34	1.00e-38	151.00
IUUC-Gma-043778	Glycine max	65.25	1.00e-41	161.00
IUUC-Lpe-050908	Leersia perrieri	77.30	5.00e-64	235.00
IUUC-Mtr-057937	Medicago truncatula	66.39	5.00e-44	169.00
IUUC-Mac-064437	Musa acuminata	66.94	3.00e-45	173.00
IUUC-Ocu-074629	Oryctolagus cuniculus	37.74	5.00e-05	41.20
IUUC-Oba-075952	Oryza barthii	75.88	3.00e-62	229.00
IUUC-Obr-076576	Oryza brachyantha	84.55	3.00e-48	184.00
IUUC-Ogl-077451	Oryza glaberrima	76.69	3.00e-62	229.00
IUUC-Ogu-078699	Oryza glumaepatula	75.60	3.00e-63	233.00
IUUC-Oin-079806	Oryza indica	76.69	9.00e-62	228.00
IUUC-Olo-081071	Oryza longistaminata	77.58	9.00e-64	234.00
IUUC-Ome-081147	Oryza meridionalis	77.25	7.00e-64	235.00
IUUC-Oni-082567	Oryza nivara	75.60	7.00e-63	231.00
IUUC-Opu-083599	Oryza punctata	76.05	5.00e-63	232.00
IUUC-Oru-084855	Oryza rufipogon	75.60	7.00e-63	231.00
IUUC-Osa-086281	Oryza sativa	75.60	7.00e-63	231.00
IUUC-Ppe-101302	Prunus persica	60.87	1.00e-37	148.00
IUUC-Sit-110365	Setaria italica	78.88	5.00e-67	245.00
IUUC-Tca-121231	Theobroma cacao	70.00	9.00e-42	161.00
IUUC-Tae-123243	Triticum aestivum	72.05	6.00e-54	201.00
IUUC-Vvi-130866	Vitis vinifera	70.00	5.00e-42	162.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence