iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sit-109812

Ensembl Protein ID

Si017172m

UniProt Accession

K3YSC8; K3YSC8_SETIT

Genbank Protein ID

KQL31434.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM003528

Gene Name

LOC101778838; SETIT_017172mg

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Si017172m.g	Si017172m	Si017172m

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	9.20e-32	109.9	44	115

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           vp +f+CpIsl++MrdPv++p+Gitydr s+e wl++g+ tcPv ++pl+ edl+Pn++ rr+iq+wc +n+
   Q: 44   VPGHFVCPISLDMMRDPVTAPTGITYDRDSVEGWLERGHATCPVSGRPLRAEDLIPNHATRRMIQEWCVANR 115
           899*****************************************************************9986 PP

Organism

Setaria italica

Protein Sequence
(Fasta)

MVTPVSRSRH RPRAVRVAVA EVPLTTRRTR QPAPTPAAAA EPSVPGHFVC PISLDMMRDP 60
VTAPTGITYD RDSVEGWLER GHATCPVSGR PLRAEDLIPN HATRRMIQEW CVANRALGVE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTCACGC CGGTGTCCCG CTCTCGCCAC CGCCCGCGCG CGGTGCGGGT GGCGGTGGCC 60
GAGGTCCCGC TCACCACGAG GCGGACGAGG CAGCCCGCGC CGACGCCGGC GGCGGCCGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

sita:101778838

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000169	Aegilops tauschii	78.05	3.00e-99	353.00
IUUC-Hvu-047616	Hordeum vulgare	77.47	1.00e-164	571.00
IUUC-Mac-065672	Musa acuminata	47.80	6.00e-99	353.00
IUUC-Oba-075080	Oryza barthii	59.80	2.00e-112	398.00
IUUC-Obr-076534	Oryza brachyantha	72.71	2.00e-149	521.00
IUUC-Ogl-077723	Oryza glaberrima	73.06	3.00e-143	501.00
IUUC-Ogu-078447	Oryza glumaepatula	69.65	1.00e-144	505.00
IUUC-Ome-081665	Oryza meridionalis	74.70	6.00e-150	523.00
IUUC-Oni-082092	Oryza nivara	73.06	3.00e-143	501.00
IUUC-Opu-083482	Oryza punctata	71.49	9.00e-155	539.00
IUUC-Oru-084868	Oryza rufipogon	73.06	3.00e-143	501.00
IUUC-Osa-085472	Oryza sativa	73.06	3.00e-143	501.00
IUUC-Sbi-114336	Sorghum bicolor	82.72	4.00e-164	570.00
IUUC-Tae-124399	Triticum aestivum	76.09	2.00e-162	565.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence