iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-114568

Ensembl Protein ID

Sb04g028360.1

UniProt Accession

C5XZ64; C5XZ64_SORBI

Genbank Protein ID

EES07284.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000763

Gene Name

SORBI_004G242900

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb04g028360	Sb04g028360.1	Sb04g028360.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.90e-28	98.1	191	227

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           H d vt+la  +d  ll s+s+D ++kvW+l  ++++
   Q: 191  HVDAVTALAVsPDgALLYSASWDRSVKVWRLPGFRCV 227
           99*********99999**************9888887 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MNSASEQELS QIRQHEPAEA MLSQAVSLSS QPSLPSLPSL GPRDLNVSPC HHRCVATLRD 60
HASYVSALAF DGHSLYSASS DGRIRVCPLG DASGRQEQQR DDDDGCRATV VVAACDSSVK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAATTCCG CCAGTGAGCA AGAGCTGAGC CAAATCCGGC AGCACGAGCC TGCAGAAGCT 60
ATGCTCTCTC AGGCCGTGTC GCTCTCGTCG CAACCAAGCC TTCCTTCCCT GCCATCGTTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

sbi:SORBI_04g028360

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002783	Amborella trichopoda	42.24	8.00e-69	253.00
IUUC-Aly-006280	Arabidopsis lyrata	43.85	3.00e-72	264.00
IUUC-Ath-006722	Arabidopsis thaliana	52.40	7.00e-82	296.00
IUUC-Bdi-014607	Brachypodium distachyon	62.34	1.00e-113	402.00
IUUC-Bol-016325	Brassica oleracea	51.94	2.00e-78	285.00
IUUC-Bra-018099	Brassica rapa	53.29	2.00e-88	318.00
IUUC-Gma-043243	Glycine max	45.92	4.00e-87	313.00
IUUC-Hvu-047304	Hordeum vulgare	63.87	5.00e-120	423.00
IUUC-Lpe-050736	Leersia perrieri	64.81	3.00e-132	464.00
IUUC-Mtr-057831	Medicago truncatula	41.36	2.00e-75	275.00
IUUC-Mac-064538	Musa acuminata	55.41	7.00e-106	376.00
IUUC-Oba-075265	Oryza barthii	60.24	9.00e-88	316.00
IUUC-Obr-076628	Oryza brachyantha	65.21	3.00e-137	481.00
IUUC-Ogl-076961	Oryza glaberrima	68.40	1.00e-127	448.00
IUUC-Ogu-078745	Oryza glumaepatula	66.92	3.00e-133	467.00
IUUC-Oin-079355	Oryza indica	67.33	1.00e-125	442.00
IUUC-Olo-080540	Oryza longistaminata	63.98	1.00e-112	399.00
IUUC-Ome-081476	Oryza meridionalis	69.85	6.00e-127	446.00
IUUC-Oni-082952	Oryza nivara	67.16	1.00e-125	441.00
IUUC-Opu-083726	Oryza punctata	69.25	7.00e-132	462.00
IUUC-Oru-084480	Oryza rufipogon	67.08	5.00e-125	439.00
IUUC-Osa-086252	Oryza sativa	67.22	2.00e-125	441.00
IUUC-Pop-099181	Populus trichocarpa	45.62	7.00e-82	296.00
IUUC-Ppe-101853	Prunus persica	46.39	2.00e-87	314.00
IUUC-Sit-109950	Setaria italica	79.59	5.00e-150	523.00
IUUC-Sly-111917	Solanum lycopersicum	44.81	5.00e-85	307.00
IUUC-Stu-112792	Solanum tuberosum	44.22	1.00e-78	285.00
IUUC-Tca-121089	Theobroma cacao	45.04	1.00e-90	325.00
IUUC-Tae-124515	Triticum aestivum	62.40	5.00e-115	406.00
IUUC-Tur-126500	Triticum urartu	62.76	4.00e-117	414.00
IUUC-Vvi-131635	Vitis vinifera	47.00	4.00e-89	320.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence