iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121516

Ensembl Protein ID

EOY26660

UniProt Accession

A0A061G9Z9; A0A061G9Z9_THECC

Genbank Protein ID

EOY26660.1

Protein Name

RING/U-box superfamily protein

Genbank Nucleotide ID

CM001884

Gene Name

TCM_028608

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_028608	EOY26660	EOY26660

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	6.80e-07	30.6	361	402

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl  +   d+++ lpC Hvfh +C+ kw       + +++CPlC+
   Q: 361  CCICLAKYadNDELRELPCIHVFHVECVDKW------LKINASCPLCK 402
           ******9988556******************......**********7 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MDSSSLEESS EQTDRYPLLM ERVESHSDQE HIIDITRHDD ASSSSSHDEQ PPGLNLAQSE 60
DRPSSSTQAP TNQTSSSNRL NSRNSSFMRR SDGYGRRRRS PLNSGLWISV ELVVTVSQII 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAGAGGTGGG TTTTGAAAAG CTTAATCAGT GAATCTATTG GCACTTCTTC TTTTTATTTA 60
CTCTCATATA CCATCAGATA TTTAATATTC AAAACGTTGG TAAGGTTCCA ATCTTTTTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001841--Znf_RING
IPR011016--Znf_RING-CH
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING
SM00744--RINGv

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000618	Aegilops tauschii	57.29	1.00e-123	436.00
IUUC-Atr-002558	Amborella trichopoda	55.19	6.00e-109	386.00
IUUC-Aly-006190	Arabidopsis lyrata	61.65	6.00e-126	442.00
IUUC-Ath-007004	Arabidopsis thaliana	61.26	4.00e-124	436.00
IUUC-Bdi-014783	Brachypodium distachyon	57.25	2.00e-108	384.00
IUUC-Bol-016575	Brassica oleracea	60.48	1.00e-107	382.00
IUUC-Bra-017338	Brassica rapa	58.95	2.00e-114	404.00
IUUC-Cme-027312	Cyanidioschyzon merolae	28.89	9.00e-21	93.60
IUUC-Dse-031512	Dothistroma septosporum	43.28	1.00e-08	54.30
IUUC-Gma-043870	Glycine max	73.53	4.00e-167	579.00
IUUC-Hvu-047447	Hordeum vulgare	58.93	4.00e-124	437.00
IUUC-Lpe-050851	Leersia perrieri	57.11	9.00e-123	432.00
IUUC-Mac-065469	Musa acuminata	61.48	2.00e-128	451.00
IUUC-Oba-075730	Oryza barthii	58.10	1.00e-122	432.00
IUUC-Obr-076189	Oryza brachyantha	59.19	2.00e-121	428.00
IUUC-Ogl-077454	Oryza glaberrima	58.10	1.00e-122	432.00
IUUC-Ogu-078902	Oryza glumaepatula	58.35	1.00e-123	435.00
IUUC-Oin-079324	Oryza indica	58.10	1.00e-122	432.00
IUUC-Olo-080365	Oryza longistaminata	58.35	1.00e-123	435.00
IUUC-Oni-082514	Oryza nivara	58.10	1.00e-122	432.00
IUUC-Opu-083647	Oryza punctata	58.61	5.00e-124	436.00
IUUC-Oru-084575	Oryza rufipogon	55.16	3.00e-115	407.00
IUUC-Ppa-095270	Physcomitrella patens	58.20	4.00e-81	294.00
IUUC-Ppe-101804	Prunus persica	77.26	5.00e-168	583.00
IUUC-Ptt-103787	Puccinia triticina	44.44	3.00e-10	57.40
IUUC-Smo-109080	Selaginella moellendorffii	61.49	9.00e-97	346.00
IUUC-Sbi-113823	Sorghum bicolor	57.50	6.00e-119	419.00
IUUC-Vvi-131276	Vitis vinifera	76.66	5.00e-136	476.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence