iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bta-012605

Ensembl Protein ID

ENSBTAP00000024220.5

UniProt Accession

F1MCK7; F1MCK7_BOVIN

Genbank Protein ID

ENSBTAP00000024220

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

DAAA02031570

Gene Name

WDR43

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSBTAG00000018196.5	ENSBTAT00000024220.5	ENSBTAP00000024220.5

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.00e-16	59.6	124	159

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           gH ++v+c+++ +d + l s+sdD+ i  W++ t++
   Q: 124  GHDNRVNCIQWhQDnGCLYSCSDDKHIVEWNTQTCK 159
           8***********77799*********9866665554 PP

Organism

Bos taurus

Protein Sequence
(Fasta)

MAAGGGGVAD PLSPAGVPCA FSPQSQAYFA LASADGHLRV WETANNRLHQ EYVPSAHLSG 60
TCTCLAWAPA RLQAKEGPQR KKRKSEAIVT SNQADLLALG TAVGSILLYS TVKGELHSKL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGGCGG GTGGCGGTGG TGTTGCCGAC CCCCTGTCCC CCGCGGGGGT CCCCTGCGCT 60
TTCTCCCCGC AGAGCCAGGC CTATTTCGCT TTAGCGTCTG CCGATGGTCA CCTGCGAGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR023302--Pept_S9A_N
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04003--Utp12
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0001650--C:fibrillar center
GO:0003723--F:RNA binding

KEGG

bta:538915

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001865	Ailuropoda melanoleuca	94.41	0.00e+00	1127.00
IUUC-Atr-002533	Amborella trichopoda	20.58	2.00e-25	110.00
IUUC-Apl-003242	Anas platyrhynchos	75.90	0.00e+00	817.00
IUUC-Aca-004607	Anolis carolinensis	71.38	0.00e+00	871.00
IUUC-Aly-006074	Arabidopsis lyrata	24.73	1.00e-15	78.20
IUUC-Ath-007222	Arabidopsis thaliana	24.73	3.00e-15	77.00
IUUC-Ame-011014	Astyanax mexicanus	54.78	1.00e-172	600.00
IUUC-Bdi-014072	Brachypodium distachyon	20.32	1.00e-19	91.70
IUUC-Bol-016255	Brassica oleracea	26.26	4.00e-21	96.70
IUUC-Bra-016850	Brassica rapa	26.94	1.00e-22	101.00
IUUC-Cja-019620	Callithrix jacchus	92.83	0.00e+00	1121.00
IUUC-Cfa-020520	Canis familiaris	94.71	0.00e+00	1171.00
IUUC-Cpo-022456	Cavia porcellus	88.85	0.00e+00	1060.00
IUUC-Cho-024726	Choloepus hoffmanni	90.85	0.00e+00	1062.00
IUUC-Cin-025761	Ciona intestinalis	36.44	4.00e-97	348.00
IUUC-Dre-028051	Danio rerio	55.21	5.00e-174	604.00
IUUC-Dno-030031	Dasypus novemcinctus	91.32	0.00e+00	1107.00
IUUC-Dme-031653	Drosophila melanogaster	26.70	5.00e-45	175.00
IUUC-Ete-032863	Echinops telfairi	79.81	8.00e-92	331.00
IUUC-Eca-033243	Equus caballus	94.36	0.00e+00	972.00
IUUC-Eeu-034970	Erinaceus europaeus	88.10	0.00e+00	804.00
IUUC-Fca-036009	Felis catus	94.07	0.00e+00	1127.00
IUUC-Fal-037264	Ficedula albicollis	73.19	0.00e+00	789.00
IUUC-Gmo-039124	Gadus morhua	56.85	0.00e+00	630.00
IUUC-Gga-040862	Gallus gallus	74.23	0.00e+00	866.00
IUUC-Gac-041468	Gasterosteus aculeatus	55.50	0.00e+00	652.00
IUUC-Gma-042795	Glycine max	21.02	4.00e-13	70.10
IUUC-Ggo-044432	Gorilla gorilla	92.15	0.00e+00	1120.00
IUUC-Hsa-047036	Homo sapiens	92.15	0.00e+00	1118.00
IUUC-Itr-048644	Ictidomys tridecemlineatus	91.65	0.00e+00	1105.00
IUUC-Lch-049553	Latimeria chalumnae	67.02	0.00e+00	759.00
IUUC-Laf-053462	Loxodonta africana	91.15	0.00e+00	1138.00
IUUC-Mcc-055239	Macaca mulatta	92.67	0.00e+00	1118.00
IUUC-Mtr-057977	Medicago truncatula	21.62	7.00e-19	89.00
IUUC-Mga-060079	Meleagris gallopavo	75.52	0.00e+00	794.00
IUUC-Mmr-061472	Microcebus murinus	90.75	0.00e+00	1125.00
IUUC-Mdo-061972	Monodelphis domestica	78.22	0.00e+00	1006.00
IUUC-Mmu-063354	Mus musculus	87.81	0.00e+00	1054.00
IUUC-Mac-065064	Musa acuminata	23.64	3.00e-17	83.20
IUUC-Mpu-066877	Mustela putorius furo	94.16	0.00e+00	1146.00
IUUC-Mlu-067476	Myotis lucifugus	90.82	0.00e+00	1089.00
IUUC-Nle-069119	Nomascus leucogenys	92.15	0.00e+00	1116.00
IUUC-Ont-072093	Oreochromis niloticus	55.46	0.00e+00	683.00
IUUC-Oan-072944	Ornithorhynchus anatinus	73.32	0.00e+00	873.00
IUUC-Ocu-074472	Oryctolagus cuniculus	91.15	0.00e+00	1069.00
IUUC-Oba-075009	Oryza barthii	19.70	1.00e-14	74.70
IUUC-Ogl-077189	Oryza glaberrima	20.13	1.00e-14	75.10
IUUC-Oin-079064	Oryza indica	19.70	1.00e-14	75.10
IUUC-Opu-083604	Oryza punctata	20.05	1.00e-13	71.60
IUUC-Oru-084620	Oryza rufipogon	19.70	1.00e-14	74.70
IUUC-Osa-085345	Oryza sativa	19.70	6.00e-15	75.90
IUUC-Ola-086626	Oryzias latipes	54.98	0.00e+00	671.00
IUUC-Oga-087911	Otolemur garnettii	91.86	0.00e+00	1092.00
IUUC-Ptr-091603	Pan troglodytes	92.15	0.00e+00	1118.00
IUUC-Pan-092569	Papio anubis	92.67	0.00e+00	1118.00
IUUC-Pma-094287	Petromyzon marinus	52.93	0.00e+00	639.00
IUUC-Ppa-095327	Physcomitrella patens	25.00	4.00e-37	149.00
IUUC-Pfo-097292	Poecilia formosa	55.35	0.00e+00	643.00
IUUC-Pab-097878	Pongo abelii	92.54	0.00e+00	1103.00
IUUC-Pop-099418	Populus trichocarpa	22.48	1.00e-20	94.70
IUUC-Pca-100941	Procavia capensis	85.79	0.00e+00	1006.00
IUUC-Ppe-101779	Prunus persica	20.20	7.00e-20	92.40
IUUC-Pva-102493	Pteropus vampyrus	86.10	0.00e+00	1030.00
IUUC-Rno-105084	Rattus norvegicus	87.98	0.00e+00	1050.00
IUUC-Sha-107486	Sarcophilus harrisii	80.03	0.00e+00	986.00
IUUC-Smo-108825	Selaginella moellendorffii	22.76	3.00e-22	100.00
IUUC-Sit-110825	Setaria italica	20.54	2.00e-18	87.80
IUUC-Sly-111365	Solanum lycopersicum	23.86	2.00e-24	107.00
IUUC-Stu-112812	Solanum tuberosum	24.34	1.00e-23	104.00
IUUC-Sar-113326	Sorex araneus	93.80	1.00e-140	493.00
IUUC-Sbi-114426	Sorghum bicolor	21.13	1.00e-21	97.80
IUUC-Tgu-116726	Taeniopygia guttata	70.64	0.00e+00	853.00
IUUC-Tru-117848	Takifugu rubripes	54.62	0.00e+00	640.00
IUUC-Tsy-119091	Tarsius syrichta	64.68	1.00e-133	470.00
IUUC-Tni-120591	Tetraodon nigroviridis	55.48	0.00e+00	646.00
IUUC-Tca-121576	Theobroma cacao	25.00	4.00e-17	83.20
IUUC-Tae-125648	Triticum aestivum	20.09	6.00e-17	82.40
IUUC-Tbe-127832	Tupaia belangeri	91.98	0.00e+00	958.00
IUUC-Ttr-128812	Tursiops truncatus	94.85	0.00e+00	997.00
IUUC-Xma-133557	Xiphophorus maculatus	55.69	0.00e+00	647.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence