iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114279

UUCD1 version

UUC-SoB-00228

Ensembl Protein ID

Sb01g032180.1

UniProt Accession

C5WWH5; C5WWH5_SORBI

Genbank Protein ID

EER92108.1; KXG39111.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000760; CM000760

Gene Name

SORBI_001G333200

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb01g032180	Sb01g032180.1	Sb01g032180.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	8.20e-08	33.5	45	100

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadCl..qkw.....pglknssskefrCPlCr 46
           C+iC+e+f   ++ p+vl CgH+++++C+   +w     p  + +   ++ CP+C+
   Q: 45   CPICWESFnivENVPYVLWCGHTMCKNCIlgLQWavikvPTVPIQLPFFICCPWCN 100
           ********999999***************999999999999999999999*****7 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MWGFASNAWA SGLGKRSPPN CTSSSAAGSD DEASSCTSRE EGLECPICWE SFNIVENVPY 60
VLWCGHTMCK NCILGLQWAV IKVPTVPIQL PFFICCPWCN LLSLRILYKG NLTFPRKNYF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTGGCCATCC GCACCGCCAC CGCAGATCCC CAATTCGTTT CCTCCCACCG AGCCAAGCGG 60
CGACGACGGC GGTCGCAGCG TCCCCTTCCC TCCTCCCTCC GTACCGCCGC CACAGGTGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR027370--Znf-RING_LisH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13445--zf-RING_UBOX

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

sbi:SORBI_01g032180

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014158	Brachypodium distachyon	80.52	3.00e-115	407.00
IUUC-Gac-041657	Gasterosteus aculeatus	36.51	6.00e-07	48.50
IUUC-Lch-049791	Latimeria chalumnae	36.51	2.00e-06	47.00
IUUC-Lpe-051412	Leersia perrieri	86.89	1.00e-128	451.00
IUUC-Loc-052573	Lepisosteus oculatus	38.10	2.00e-06	46.60
IUUC-Oba-075020	Oryza barthii	87.27	7.00e-132	462.00
IUUC-Ogl-077905	Oryza glaberrima	87.27	7.00e-132	462.00
IUUC-Ogu-078854	Oryza glumaepatula	87.64	3.00e-132	463.00
IUUC-Oin-079896	Oryza indica	87.27	4.00e-132	462.00
IUUC-Olo-080692	Oryza longistaminata	86.89	9.00e-131	458.00
IUUC-Oni-082962	Oryza nivara	87.64	3.00e-132	463.00
IUUC-Opu-084174	Oryza punctata	86.89	3.00e-130	456.00
IUUC-Oru-084363	Oryza rufipogon	87.27	2.00e-131	460.00
IUUC-Osa-085569	Oryza sativa	87.27	2.00e-131	460.00
IUUC-Pop-100053	Populus trichocarpa	64.93	8.00e-82	295.00
IUUC-Pva-102146	Pteropus vampyrus	30.00	3.00e-05	40.80
IUUC-Sha-107282	Sarcophilus harrisii	24.52	1.00e-06	45.40
IUUC-Sit-109790	Setaria italica	91.01	3.00e-131	459.00
IUUC-Sly-111787	Solanum lycopersicum	66.67	5.00e-98	349.00
IUUC-Stu-112131	Solanum tuberosum	65.43	3.00e-97	347.00
IUUC-Tni-120872	Tetraodon nigroviridis	36.51	1.00e-06	47.40
IUUC-Vvi-130901	Vitis vinifera	65.69	5.00e-81	293.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence