iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-016163

Ensembl Protein ID

Bo3g042990.1

UniProt Accession

A0A0D3B7S6; A0A0D3B7S6_BRAOL

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo3g042990	Bo3g042990.1	Bo3g042990.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.80e-15	56.3	186	213

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 7    tclaf.sd.tllvsGsdDgtikvWDlrt 32
            ++ + +   ++ sGs Dg i++WD ++
   Q: 186  LSVTWsPAaQRIFSGSSDGLIRCWDAHS 213
           58899866789**************765 PP

Organism

Brassica oleracea

Protein Sequence
(Fasta)

MLEYRCSSVD WKPSPVVALA NSSDDTQVAA AREDGSLEIW LVSPGAVGWH CQLTIHGDPN 60
SRISSLAWCR AGSQGLPSGR LFSSSIDGSI SEWDLFDLKQ KVVLDSIGIS IWQMAVSPTY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCTCGAGT ACCGTTGCAG CTCCGTTGAT TGGAAGCCAT CTCCGGTGGT AGCCCTAGCA 60
AACAGCTCCG ACGACACTCA AGTCGCGGCG GCTCGCGAGG ACGGTTCTCT TGAAATCTGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR027295--Quinoprotein_ADH-like_fam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus
GO:0009793--P:embryo development ending in seed dormancy
GO:0010311--P:lateral root formation
GO:0048366--P:leaf development
GO:0010305--P:leaf vascular tissue pattern formation
GO:0010073--P:meristem maintenance
GO:2000012--P:regulation of auxin polar transport
GO:0010449--P:root meristem growth

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001161	Aegilops tauschii	48.34	0.00e+00	699.00
IUUC-Aml-001310	Ailuropoda melanoleuca	24.33	1.00e-50	194.00
IUUC-Atr-003076	Amborella trichopoda	52.26	0.00e+00	755.00
IUUC-Aly-006271	Arabidopsis lyrata	87.21	0.00e+00	1336.00
IUUC-Ath-007331	Arabidopsis thaliana	86.03	0.00e+00	1321.00
IUUC-Ago-007843	Ashbya gossypii	22.98	6.00e-28	119.00
IUUC-Ang-009592	Aspergillus niger	26.15	8.00e-27	115.00
IUUC-Ame-010957	Astyanax mexicanus	24.44	7.00e-46	178.00
IUUC-Bta-012473	Bos taurus	24.34	6.00e-50	192.00
IUUC-Bdi-014203	Brachypodium distachyon	51.55	0.00e+00	785.00
IUUC-Bra-017482	Brassica rapa	97.13	0.00e+00	1511.00
IUUC-Cja-019942	Callithrix jacchus	23.83	3.00e-49	189.00
IUUC-Cfa-020549	Canis familiaris	26.42	2.00e-40	160.00
IUUC-Cpo-022088	Cavia porcellus	26.13	2.00e-47	184.00
IUUC-Csa-023773	Chlorocebus sabaeus	24.79	2.00e-51	197.00
IUUC-Cho-024302	Choloepus hoffmanni	23.60	1.00e-36	147.00
IUUC-Cin-025384	Ciona intestinalis	26.21	2.00e-48	186.00
IUUC-Dre-027460	Danio rerio	23.11	4.00e-46	179.00
IUUC-Dno-029594	Dasypus novemcinctus	24.72	2.00e-47	183.00
IUUC-Dor-030564	Dipodomys ordii	28.00	3.00e-15	76.60
IUUC-Dse-031179	Dothistroma septosporum	21.91	2.00e-26	114.00
IUUC-Ete-032655	Echinops telfairi	24.57	5.00e-32	132.00
IUUC-Eca-033838	Equus caballus	24.35	2.00e-49	190.00
IUUC-Eeu-034548	Erinaceus europaeus	23.61	2.00e-42	166.00
IUUC-Fca-035715	Felis catus	24.52	1.00e-50	194.00
IUUC-Fal-037394	Ficedula albicollis	23.79	6.00e-36	145.00
IUUC-Gmo-039235	Gadus morhua	21.95	1.00e-42	168.00
IUUC-Ggr-040043	Gaeumannomyces graminis	26.76	3.00e-25	110.00
IUUC-Gga-041172	Gallus gallus	24.66	8.00e-49	188.00
IUUC-Gac-042466	Gasterosteus aculeatus	24.54	3.00e-47	182.00
IUUC-Gma-044129	Glycine max	55.74	0.00e+00	874.00
IUUC-Ggo-045416	Gorilla gorilla	24.28	1.00e-42	167.00
IUUC-Hsa-046115	Homo sapiens	24.94	5.00e-49	189.00
IUUC-Hvu-047229	Hordeum vulgare	53.04	0.00e+00	655.00
IUUC-Itr-048015	Ictidomys tridecemlineatus	24.63	9.00e-50	191.00
IUUC-Lch-050153	Latimeria chalumnae	26.70	6.00e-47	182.00
IUUC-Lpe-051220	Leersia perrieri	51.69	0.00e+00	766.00
IUUC-Laf-053613	Loxodonta africana	23.63	3.00e-47	183.00
IUUC-Mcc-055707	Macaca mulatta	25.18	9.00e-50	191.00
IUUC-Meu-056800	Macropus eugenii	22.53	9.00e-15	75.10
IUUC-Mtr-058393	Medicago truncatula	52.24	0.00e+00	765.00
IUUC-Mga-060018	Meleagris gallopavo	26.11	5.00e-41	162.00
IUUC-Mmr-061115	Microcebus murinus	26.13	2.00e-47	183.00
IUUC-Mdo-062235	Monodelphis domestica	24.25	8.00e-50	191.00
IUUC-Mmu-063158	Mus musculus	25.00	6.00e-50	191.00
IUUC-Mac-065380	Musa acuminata	55.69	0.00e+00	892.00
IUUC-Mpu-065805	Mustela putorius furo	24.52	7.00e-51	195.00
IUUC-Mlu-066951	Myotis lucifugus	23.85	4.00e-49	189.00
IUUC-Nle-069657	Nomascus leucogenys	24.43	2.00e-50	193.00
IUUC-Opr-070250	Ochotona princeps	23.79	6.00e-45	175.00
IUUC-Ont-072642	Oreochromis niloticus	24.70	5.00e-42	165.00
IUUC-Ocu-074741	Oryctolagus cuniculus	24.43	2.00e-46	180.00
IUUC-Oba-074974	Oryza barthii	51.18	0.00e+00	781.00
IUUC-Obr-076586	Oryza brachyantha	54.93	0.00e+00	674.00
IUUC-Ogl-077782	Oryza glaberrima	52.23	0.00e+00	791.00
IUUC-Ogu-078333	Oryza glumaepatula	49.49	0.00e+00	765.00
IUUC-Oin-079852	Oryza indica	52.53	0.00e+00	792.00
IUUC-Olo-080370	Oryza longistaminata	53.82	0.00e+00	633.00
IUUC-Ome-081442	Oryza meridionalis	51.61	0.00e+00	776.00
IUUC-Oni-082341	Oryza nivara	49.26	0.00e+00	761.00
IUUC-Opu-083824	Oryza punctata	50.84	0.00e+00	768.00
IUUC-Oru-084827	Oryza rufipogon	51.12	0.00e+00	778.00
IUUC-Osa-085742	Oryza sativa	52.29	0.00e+00	788.00
IUUC-Ola-086466	Oryzias latipes	25.57	1.00e-43	171.00
IUUC-Olu-087761	Ostreococcus lucimarinus	26.72	2.00e-63	236.00
IUUC-Oga-088721	Otolemur garnettii	26.23	1.00e-43	171.00
IUUC-Oar-089532	Ovis aries	24.00	5.00e-50	192.00
IUUC-Ptr-091604	Pan troglodytes	24.55	1.00e-50	194.00
IUUC-Pan-092060	Papio anubis	29.94	1.00e-33	137.00
IUUC-Psi-093070	Pelodiscus sinensis	25.21	5.00e-42	165.00
IUUC-Pma-094201	Petromyzon marinus	24.82	5.00e-35	142.00
IUUC-Pfo-097207	Poecilia formosa	26.17	7.00e-46	178.00
IUUC-Pab-097746	Pongo abelii	24.31	4.00e-50	192.00
IUUC-Pop-099991	Populus trichocarpa	64.14	0.00e+00	1051.00
IUUC-Pca-100562	Procavia capensis	32.07	3.00e-22	100.00
IUUC-Ppe-101747	Prunus persica	66.02	0.00e+00	1031.00
IUUC-Pva-103054	Pteropus vampyrus	24.55	1.00e-50	194.00
IUUC-Rno-105155	Rattus norvegicus	24.64	5.00e-49	188.00
IUUC-Sce-106369	Saccharomyces cerevisiae	24.22	3.00e-30	127.00
IUUC-Sha-107149	Sarcophilus harrisii	24.01	7.00e-48	185.00
IUUC-Sja-107777	Schizosaccharomyces japonicus	25.06	8.00e-51	194.00
IUUC-Smo-108851	Selaginella moellendorffii	40.38	4.00e-162	565.00
IUUC-Sit-110454	Setaria italica	53.25	0.00e+00	798.00
IUUC-Sly-111020	Solanum lycopersicum	60.29	0.00e+00	922.00
IUUC-Stu-112330	Solanum tuberosum	60.90	0.00e+00	922.00
IUUC-Sar-113254	Sorex araneus	28.10	5.00e-17	82.80
IUUC-Sbi-114624	Sorghum bicolor	53.06	0.00e+00	669.00
IUUC-Tru-118733	Takifugu rubripes	23.37	5.00e-40	159.00
IUUC-Tsy-119213	Tarsius syrichta	31.78	8.00e-29	121.00
IUUC-Tca-121606	Theobroma cacao	60.36	0.00e+00	975.00
IUUC-Tae-125441	Triticum aestivum	50.30	0.00e+00	780.00
IUUC-Ttr-128720	Tursiops truncatus	24.31	5.00e-50	192.00
IUUC-Vpa-130412	Vicugna pacos	28.21	2.00e-27	117.00
IUUC-Vvi-131256	Vitis vinifera	61.32	0.00e+00	967.00
IUUC-Xtr-131828	Xenopus tropicalis	23.36	2.00e-38	153.00
IUUC-Xma-133394	Xiphophorus maculatus	25.87	8.00e-47	181.00
IUUC-Yli-134565	Yarrowia lipolytica	25.64	2.00e-29	124.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence