iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ppe-101515

Ensembl Protein ID

EMJ01067

UniProt Accession

M5VJ36; M5VJ36_PRUPE

Genbank Protein ID

EMJ01067.1

Protein Name

tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit; WD repeat-containing protein 4 homolog

Genbank Nucleotide ID

KB639104

Gene Name

TRM82; PRUPE_ppa006007mg

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PRUPE_ppa006007mg	EMJ01067	EMJ01067

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.10e-18	64.7	200	241

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf......sdtllvsGsdDgtikvWDlrtgvll 36
           gHt+ v+claf      + ++lvsGs+D t+++WD+++g ll
   Q: 200  GHTEFVSCLAFvcthecPQGFLVSGSGDSTVRLWDISSGSLL 241
           8************99876699***************999887 PP

Organism

Prunus persica

Functional Description
(View)

Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit.

Protein Sequence
(Fasta)

MEDAAMENGE TNKDSEVAPA LIAVHPTQNS VAVAVGSDLR VFDLLGGCAV SLVDDSDGSL 60
HKDSIRAIRY GANGKLFVSA GDDKLVKIWS TESWRCISSL CSEKRVSAVA ISNDGSYVCF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACGACCGCTA ACAAGACCTT TCTGTGAGCA ACAATGGAGG ACGCTGCGAT GGAAAACGGA 60
GAGACAAACA AGGATAGTGA GGTGGCTCCT GCCCTAATTG CAGTCCACCC GACCCAGAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0819--tRNA processing
KW-0853--WD repeat

Interpro

IPR028884--Trm82
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus
GO:0036265--P:RNA (guanine-N7)-methylation
GO:0030488--P:tRNA methylation

KEGG

pper:PRUPE_ppa006007mg

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000556	Aegilops tauschii	53.83	3.00e-102	364.00
IUUC-Atr-002431	Amborella trichopoda	59.20	1.00e-37	147.00
IUUC-Apl-003975	Anas platyrhynchos	30.36	7.00e-20	90.50
IUUC-Aly-005769	Arabidopsis lyrata	65.27	7.00e-152	529.00
IUUC-Ath-006733	Arabidopsis thaliana	64.52	1.00e-148	518.00
IUUC-Ame-010613	Astyanax mexicanus	28.62	3.00e-18	85.50
IUUC-Bgr-012067	Blumeria graminis	29.05	1.00e-12	67.00
IUUC-Bta-012788	Bos taurus	28.86	6.00e-21	94.40
IUUC-Bdi-014458	Brachypodium distachyon	56.52	2.00e-110	391.00
IUUC-Bol-016398	Brassica oleracea	62.09	1.00e-137	481.00
IUUC-Bra-016644	Brassica rapa	63.36	6.00e-141	494.00
IUUC-Cpo-021963	Cavia porcellus	35.96	2.00e-20	92.40
IUUC-Csa-024148	Chlorocebus sabaeus	34.50	5.00e-13	68.20
IUUC-Cne-026834	Cryptococcus neoformans	27.39	2.00e-15	76.60
IUUC-Dre-028427	Danio rerio	34.45	2.00e-25	109.00
IUUC-Dor-030522	Dipodomys ordii	27.99	6.00e-21	94.40
IUUC-Dme-032136	Drosophila melanogaster	33.88	2.00e-11	62.80
IUUC-Fca-035833	Felis catus	27.42	3.00e-18	85.10
IUUC-Fal-037497	Ficedula albicollis	29.96	2.00e-20	92.40
IUUC-Gga-040547	Gallus gallus	28.74	9.00e-18	83.60
IUUC-Gac-041761	Gasterosteus aculeatus	29.13	4.00e-21	94.70
IUUC-Gma-043722	Glycine max	67.83	1.00e-155	541.00
IUUC-Ggo-045340	Gorilla gorilla	34.00	8.00e-12	63.90
IUUC-Hsa-046403	Homo sapiens	35.52	7.00e-13	67.40
IUUC-Hvu-047643	Hordeum vulgare	56.59	4.00e-117	414.00
IUUC-Itr-048103	Ictidomys tridecemlineatus	33.47	7.00e-22	97.40
IUUC-Kpa-049283	Komagataella pastoris	31.25	4.00e-15	74.70
IUUC-Lch-050682	Latimeria chalumnae	31.76	8.00e-23	100.00
IUUC-Lpe-050712	Leersia perrieri	56.65	2.00e-125	441.00
IUUC-Loc-052599	Lepisosteus oculatus	32.77	4.00e-26	111.00
IUUC-Laf-054390	Loxodonta africana	35.71	8.00e-21	93.60
IUUC-Mcc-054747	Macaca mulatta	34.50	2.00e-13	68.90
IUUC-Mtr-058600	Medicago truncatula	63.82	1.00e-144	505.00
IUUC-Mla-059135	Melampsora laricipopulina	28.11	5.00e-21	95.10
IUUC-Mga-059876	Meleagris gallopavo	29.55	1.00e-19	89.70
IUUC-Mvi-060359	Microbotryum violaceum	28.05	4.00e-11	62.40
IUUC-Mmr-061518	Microcebus murinus	32.98	1.00e-17	83.20
IUUC-Mac-065625	Musa acuminata	57.14	1.00e-124	439.00
IUUC-Nle-069914	Nomascus leucogenys	32.84	3.00e-10	58.90
IUUC-Ont-071555	Oreochromis niloticus	28.30	6.00e-22	97.80
IUUC-Oan-072951	Ornithorhynchus anatinus	29.58	3.00e-20	92.00
IUUC-Ocu-074679	Oryctolagus cuniculus	36.41	2.00e-15	75.90
IUUC-Oba-075355	Oryza barthii	53.81	3.00e-115	407.00
IUUC-Obr-076769	Oryza brachyantha	58.03	2.00e-136	477.00
IUUC-Ogl-077168	Oryza glaberrima	58.47	3.00e-131	460.00
IUUC-Ogu-078275	Oryza glumaepatula	53.57	5.00e-114	404.00
IUUC-Oin-079207	Oryza indica	58.47	3.00e-131	460.00
IUUC-Ome-081169	Oryza meridionalis	40.00	2.00e-62	232.00
IUUC-Oni-082437	Oryza nivara	53.81	6.00e-115	406.00
IUUC-Opu-084031	Oryza punctata	58.71	4.00e-130	457.00
IUUC-Oru-084380	Oryza rufipogon	53.81	6.00e-115	406.00
IUUC-Osa-085327	Oryza sativa	58.47	7.00e-131	459.00
IUUC-Ola-086716	Oryzias latipes	32.34	2.00e-22	99.40
IUUC-Olu-087708	Ostreococcus lucimarinus	34.35	1.00e-34	139.00
IUUC-Oar-090239	Ovis aries	27.70	2.00e-20	92.80
IUUC-Ptr-090851	Pan troglodytes	33.83	7.00e-12	63.90
IUUC-Pan-092558	Papio anubis	34.50	4.00e-13	68.20
IUUC-Psi-093792	Pelodiscus sinensis	26.72	3.00e-17	82.00
IUUC-Ppa-095757	Physcomitrella patens	39.91	3.00e-73	268.00
IUUC-Pfo-096465	Poecilia formosa	29.45	2.00e-20	92.40
IUUC-Pab-097722	Pongo abelii	33.33	6.00e-13	67.80
IUUC-Pop-098979	Populus trichocarpa	68.86	5.00e-163	566.00
IUUC-Pca-100753	Procavia capensis	46.74	3.00e-14	72.40
IUUC-Sja-107780	Schizosaccharomyces japonicus	23.29	4.00e-15	75.10
IUUC-Spo-108251	Schizosaccharomyces pombe	24.62	3.00e-12	65.50
IUUC-Smo-108938	Selaginella moellendorffii	42.17	6.00e-67	247.00
IUUC-Sit-110020	Setaria italica	55.61	1.00e-121	429.00
IUUC-Sly-111543	Solanum lycopersicum	65.59	2.00e-162	564.00
IUUC-Stu-111925	Solanum tuberosum	65.36	4.00e-162	563.00
IUUC-Sbi-114061	Sorghum bicolor	55.73	3.00e-123	434.00
IUUC-Tgu-117321	Taeniopygia guttata	28.74	4.00e-16	78.20
IUUC-Tru-118454	Takifugu rubripes	33.62	1.00e-22	100.00
IUUC-Tni-119894	Tetraodon nigroviridis	33.48	2.00e-20	92.40
IUUC-Tca-121746	Theobroma cacao	71.23	4.00e-165	573.00
IUUC-Tae-124459	Triticum aestivum	56.59	7.00e-118	416.00
IUUC-Tur-126254	Triticum urartu	51.79	2.00e-93	335.00
IUUC-Tbe-127683	Tupaia belangeri	48.42	8.00e-15	73.90
IUUC-Ttr-129056	Tursiops truncatus	34.78	3.00e-19	88.60
IUUC-Vvi-131428	Vitis vinifera	70.44	7.00e-178	615.00
IUUC-Xma-133605	Xiphophorus maculatus	30.90	5.00e-19	87.80

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence