iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112239

Ensembl Protein ID

PGSC0003DMT400081902

UniProt Accession

M1D591; M1D591_SOLTU

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400032151	PGSC0003DMT400081900	PGSC0003DMT400081900
PGSC0003DMG400032151	PGSC0003DMT400081901	PGSC0003DMT400081901
PGSC0003DMG400032151	PGSC0003DMT400081902	PGSC0003DMT400081902
PGSC0003DMG400032151	PGSC0003DMT400081903	PGSC0003DMT400081903

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	5.80e-24	85.2	57	128

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedl.vPnltlrrliqawceen 72
           +p+ef+Cp+++ +++dPv+l++G+t++r+sI+ w+++g++tcPvtr++l+ +++   n  l+r+i +w +e+
   Q: 57   IPQEFICPLTGLIFEDPVTLETGQTFERASIKSWISKGNRTCPVTRRSLECQNVpCSNFILKRVITNWKSEH 128
           8************************************************9999999************9987 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MKETTTLKTN MLDSFAPADL TKFIFSRITK AALEQETEEV VLPAQGVDYV GRTSTNIPQE 60
FICPLTGLIF EDPVTLETGQ TFERASIKSW ISKGNRTCPV TRRSLECQNV PCSNFILKRV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGATTTTGC ATTACATAAG ACAAGTTACA CCCTGGGCGC GTTCTGATGT GTAGTATGGT 60
GCATCAACCG CTTGGGATGC GGCGGGGGTA TTTGGAACTG ATTCTCCAGA AGAAAAAATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003133	Amborella trichopoda	40.47	5.00e-90	325.00
IUUC-Ang-009587	Aspergillus niger	46.51	3.00e-03	35.40
IUUC-Bdi-014999	Brachypodium distachyon	37.96	5.00e-34	138.00
IUUC-Gma-044073	Glycine max	44.81	1.00e-95	343.00
IUUC-Hvu-047722	Hordeum vulgare	37.76	2.00e-69	256.00
IUUC-Lpe-051567	Leersia perrieri	38.92	1.00e-71	263.00
IUUC-Mtr-058670	Medicago truncatula	42.83	1.00e-103	370.00
IUUC-Mac-065130	Musa acuminata	38.69	2.00e-76	279.00
IUUC-Oba-075449	Oryza barthii	37.29	2.00e-62	232.00
IUUC-Obr-076588	Oryza brachyantha	36.26	4.00e-71	261.00
IUUC-Ogu-078984	Oryza glumaepatula	37.08	5.00e-65	241.00
IUUC-Olo-080563	Oryza longistaminata	36.41	1.00e-29	123.00
IUUC-Ome-081747	Oryza meridionalis	36.34	2.00e-69	256.00
IUUC-Oni-082227	Oryza nivara	37.29	4.00e-60	225.00
IUUC-Opu-083803	Oryza punctata	38.78	1.00e-68	253.00
IUUC-Oru-084717	Oryza rufipogon	37.37	2.00e-62	233.00
IUUC-Osa-085390	Oryza sativa	38.00	7.00e-32	131.00
IUUC-Pop-099189	Populus trichocarpa	47.16	2.00e-108	386.00
IUUC-Ppe-101493	Prunus persica	50.73	2.00e-120	426.00
IUUC-Sit-110010	Setaria italica	36.17	3.00e-30	126.00
IUUC-Sbi-113947	Sorghum bicolor	33.61	1.00e-66	246.00
IUUC-Tca-121435	Theobroma cacao	52.42	3.00e-128	452.00
IUUC-Tae-125606	Triticum aestivum	37.14	5.00e-71	261.00
IUUC-Tur-126526	Triticum urartu	35.00	1.00e-59	223.00
IUUC-Vvi-130964	Vitis vinifera	54.64	2.00e-136	478.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence