iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-043606

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000846

Gene Name

LOC100786877; GLYMA_13G312700

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA13G38890	GLYMA13G38890.1	GLYMA13G38890.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.00e-33	115.9	5	78

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggk.tcPvtrqplteedlvPnltlrrliqawceens 73
           e+p++flCpIsl+lMrdPv++++Gitydr++Ie+wl s+++ tcPvt+q l ++dl+Pn+tlrrliq+wc  n+
   Q: 5    EIPAHFLCPISLQLMRDPVTVCTGITYDRENIERWLFSCKNnTCPVTKQCLLNHDLTPNHTLRRLIQSWCTLNA 78
           69**********************************998888****************************9876 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MDEIEIPAHF LCPISLQLMR DPVTVCTGIT YDRENIERWL FSCKNNTCPV TKQCLLNHDL 60
TPNHTLRRLI QSWCTLNASL GVERIPTPKS PIDRTQIVKL LTEAKRFPEK QLKCLTRLRS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCCACAGAG ATCAAATACA AAAATAATGG GCATCTCCGT ATACTTTATT TGTTTAAGTG 60
CAAGTCAAAA GCCTCCGTAT CAGGCTTTAT TTTCAATTTG CTACTGCCTA CACCGACGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR011987--ATPase_V1-cplx_hsu_C
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002430	Amborella trichopoda	48.64	7.00e-106	377.00
IUUC-Lpe-051695	Leersia perrieri	40.38	8.00e-68	250.00
IUUC-Mtr-057893	Medicago truncatula	79.56	5.00e-172	597.00
IUUC-Oba-075095	Oryza barthii	43.98	6.00e-77	281.00
IUUC-Ogl-077664	Oryza glaberrima	46.02	8.00e-79	287.00
IUUC-Ogu-078137	Oryza glumaepatula	44.78	2.00e-77	283.00
IUUC-Ome-081839	Oryza meridionalis	46.44	6.00e-87	314.00
IUUC-Oni-082645	Oryza nivara	44.78	2.00e-77	283.00
IUUC-Oru-084231	Oryza rufipogon	44.78	3.00e-77	282.00
IUUC-Osa-086055	Oryza sativa	44.78	3.00e-77	282.00
IUUC-Pop-099941	Populus trichocarpa	66.59	5.00e-164	570.00
IUUC-Ppe-101254	Prunus persica	66.50	5.00e-151	527.00
IUUC-Sit-110366	Setaria italica	45.89	7.00e-84	304.00
IUUC-Sly-111427	Solanum lycopersicum	59.76	6.00e-139	487.00
IUUC-Stu-112204	Solanum tuberosum	60.20	1.00e-136	479.00
IUUC-Tca-121274	Theobroma cacao	68.20	3.00e-163	567.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence