iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099765

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000352

Gene Name

POPTRDRAFT_777330; POPTR_0016s07010g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0016s07010	POPTR_0016s07010.1	POPTR_0016s07010.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	4.60e-33	114.2	5	78

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggk.tcPvtrqplteedlvPnltlrrliqawceens 73
           evp++flCpIsl++M+dPv++p+Gitydr+sIekwl s+++ tcPvt+q ++  +++Pn+tlrrliq+wc  n+
   Q: 5    EVPSFFLCPISLQIMKDPVIVPTGITYDRESIEKWLFSSKNdTCPVTKQVISGCEVTPNHTLRRLIQSWCTLNA 78
           69**********************************666666****************************9876 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MEDIEVPSFF LCPISLQIMK DPVIVPTGIT YDRESIEKWL FSSKNDTCPV TKQVISGCEV 60
TPNHTLRRLI QSWCTLNASY GVERIPTPKP PISKAQIAKL LNDAKSPEQQ VTCLRKLRSF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAATCAAACC AATTCACACA ACTCCTCAAA ACCTACTCTC AAACCAAATT TCTCTAAAGC 60
CTTCAATTCT TGGCTAGCTA CTTTCATCTA CTTGTCTACG TACTATCATC TACTTTTGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR011987--ATPase_V1-cplx_hsu_C
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

pop:POPTR_0016s07010g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Gma-043412	Glycine max	64.35	3.00e-157	547.00
IUUC-Mtr-058052	Medicago truncatula	66.11	3.00e-159	554.00
IUUC-Mac-065005	Musa acuminata	49.26	1.00e-113	402.00
IUUC-Oba-075095	Oryza barthii	46.57	4.00e-87	314.00
IUUC-Obr-076623	Oryza brachyantha	44.05	3.00e-55	207.00
IUUC-Ogl-077664	Oryza glaberrima	46.72	9.00e-89	320.00
IUUC-Ogu-078137	Oryza glumaepatula	46.32	3.00e-86	311.00
IUUC-Ome-081839	Oryza meridionalis	47.60	4.00e-96	344.00
IUUC-Oni-082645	Oryza nivara	46.32	3.00e-86	311.00
IUUC-Opu-084067	Oryza punctata	47.23	3.00e-106	378.00
IUUC-Oru-084231	Oryza rufipogon	46.32	7.00e-86	310.00
IUUC-Osa-086055	Oryza sativa	46.32	7.00e-86	310.00
IUUC-Ppe-102059	Prunus persica	66.27	2.00e-158	550.00
IUUC-Sit-110734	Setaria italica	47.74	8.00e-96	343.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence